DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5026 and mtm

DIOPT Version :9

Sequence 1:NP_001163392.1 Gene:CG5026 / 39026 FlyBaseID:FBgn0035945 Length:620 Species:Drosophila melanogaster
Sequence 2:NP_001285651.1 Gene:mtm / 33845 FlyBaseID:FBgn0025742 Length:619 Species:Drosophila melanogaster


Alignment Length:641 Identity:164/641 - (25%)
Similarity:273/641 - (42%) Gaps:156/641 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 GATVGTLCITGHHLLLSARQETSQE--------LWLLHKNIDCVEKKPSLSQNIVVGGI------ 77
            |...|.|.||.:.|...:.....||        |.::.:    |||         :||.      
  Fly    70 GPVFGALTITNYRLYFRSLPLRDQEPPVVVDVPLGVIAR----VEK---------IGGATSRGEN 121

  Fly    78 ---ITLKCKDLRIISLEIKCGKEFFNVAASLEALSA----IQNTELLYPFFYRPMYSILE----D 131
               |.:.|||:|  :|.....::..:.....|.|.|    :..:..|:.|.:....|:..    |
  Fly   122 SYGIEIFCKDMR--NLRFAHKQQNHSRRTVFEKLQANAFP
LSYSGRLFAFAHAAANSVNGNGGWD 184

  Fly   132 GYTMFRPELEFAKLISGVGMGGASSPNVANITICMPSTSTSTLTVGAGIPHPLQNGYAIEALACG 196
            |:.::.|..|..:|                                 |:|:.:            
  Fly   185 GWAVYEPLAELRRL---------------------------------GVPNDM------------ 204

  Fly   197 VGGVGGGALQSPQASCEWRITNVNRDFSVCATYGATLIVPKAITDEQIVLSAAFRDGGRFPVLSY 261
                             ||.|.:|..:::|.:|.|...||||.:|:.:...|.||...|.||||:
  Fly   205 -----------------WRATKLNESYAICDSYPAVWAVPKAASDDFLRRVAQFRSRCRLPVLSW 252

  Fly   262 RH-ENGATLMRSSQPL-SIQGIKRCRADEAILNLVL---GRSRKGFIVD---------TWGKGKS 312
            .: ...||:.|.|||| .:.| ||...|||.|:.::   .:|.|..|:|         ...||..
  Fly   253 MNPRTQATITRCSQPLVGVSG-KRNSDDEAYLSFIMEANAQSDKLTIMDARPSANAIANKAKGGG 316

  Fly   313 NTETDLHYSQWKKVNRSIGNVSSPASILDSFARLIEACNDLGCSTD--KWLSRLENSGWLSLVLN 375
            ....|    .:|.|..:..::.:...:.:|..::.|||..   :||  ||.:.::|:.||..:..
  Fly   317 YESED----AYKNVEINFLDIHNIHVMRESLRKVKEACFP---TTDDSKWQTAIDNTLWLKHIRC 374

  Fly   376 SLNASCVVAQCLDQEGSPVLVHGAKGLDSTLIVTSLVQIILNPDCRTVRGLQALIEREWIQAGHP 440
            .|..:..:...::...:.|:||.:.|.|.|..:|:|..::|:|..|||||.:.|||:||:..||.
  Fly   375 ILAGAVRIVDKVETMSTSVVVHCSDGWDRTAQLTALSMLLLDPHYRTVRGFEVLIEKEWLSFGHK 439

  Fly   441 FASRHRYSCYTPNQTRNKTSGA----TFVLFLDCIYQLYTQFPCSFEFSTQLLILLFEHSHFSQY 501
            |..|..:.       .||.|.|    .|:.|:|.::|:..||..:|||:...||.:.:|.:..::
  Fly   440 FQQRIGHG-------DNKHSDADRSPVFLQFIDSVWQVSQQFNNAFEFNEHFLITIVDHLYSCRF 497

  Fly   502 GTFLCDSERERNELNVHTRTTSLWSYLNRPDVLQTFLNPLYEP---NANVIWPSVAPI-SLELWS 562
            |||||::|.||...::..:|||||:::|  ..|..:||||:..   .|.::...:|.: |:.||.
  Fly   498 GTFLCNTEAERVAEDLKHKTTSLWTHIN--SSLDQYLNPLFPSFTHGAELVLRPIASVRSVRLWK 560

  Fly   563 DLYLRWVIDQRSSVTVMSQIQELVTREKELRTQALKLRKQAMELGQEVSNLMKSGN 618
            .||.||.....:......:.:||::::.:|.....:||             :||.|
  Fly   561 GLYCRWNPGLCAPQHGCQRTRELLSKQDQLFKLVNELR-------------LKSNN 603

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5026NP_001163392.1 PH-GRAM_MTMR9 1..106 CDD:275398 20/95 (21%)
Myotub-related 117..511 CDD:284109 111/417 (27%)
mtmNP_001285651.1 PH-GRAM_MTMR2_insect-like 57..159 CDD:270164 23/103 (22%)
Myotub-related 184..509 CDD:399535 109/401 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462319
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D34351at6960
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10807
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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