DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5026 and Mtmr12

DIOPT Version :9

Sequence 1:NP_001163392.1 Gene:CG5026 / 39026 FlyBaseID:FBgn0035945 Length:620 Species:Drosophila melanogaster
Sequence 2:XP_006232108.1 Gene:Mtmr12 / 310155 RGDID:1307902 Length:748 Species:Rattus norvegicus


Alignment Length:678 Identity:138/678 - (20%)
Similarity:248/678 - (36%) Gaps:214/678 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 IDCVE---------KKPSLSQNIVVGGIITLKCKDLRIISLEIKCGKEFFNVAASLEALSAI--- 111
            :.||:         |||...|.......:.:.|||||::...::..||        |.:..|   
  Rat   113 LHCVDQIYGVFDEKKKPLFGQLKKYPEKLVIHCKDLRVLHFCLRYTKE--------EEVKRIVSG 169

  Fly   112 -----QNTELLYPFFYRPMYSILEDGYTMFRPELEFAKLISGVGMGGASSPNVANITICMPSTST 171
                 |:.:||...|   ::|              :|..:.|.    |:.|....:....|    
  Rat   170 IIHHTQSPKLLKRLF---LFS--------------YAAAVHGT----AADPRNCTVMFDTP---- 209

  Fly   172 STLTVGAGIPHPLQNGYAIEALACGVGGVGGGALQSPQASCEWRITNVNRDFSVCATYGATLIVP 236
                          ..:..|             |:..:.|.:::..:||..:.||....|..:||
  Rat   210 --------------KDWCWE-------------LERTKGSVKYKTVSVNEGYRVCDRLPAYFVVP 247

  Fly   237 KAITDEQIVLSAAFRDGGR-FPVLSYRHENGATLMRSSQPLSIQGIKRCRADEAILNLVLGRSRK 300
            ..:.::.:.     |..|| .|:..:...||:.|::.|      .:.:.:.|.|:      :.:|
  Rat   248 TPLLEDDVK-----RFQGRGIPIWCWSCHNGSALLKMS------ALPKEQDDSAL------QIQK 295

  Fly   301 GFIVDTWGKGKSNTETDLHYSQWKKVNRS--IGNVSSPASILDSFAR-----LIEACNDLGCSTD 358
            .|:     .|...|   :|...::.|...  ..|..|...|..|:.:     ||::.::...:..
  Rat   296 SFL-----DGIYKT---IHRPPYEMVKTEDLSSNFLSLQEIQSSYCKFKQLFLIDSSSEFWDTDV 352

  Fly   359 KWLSRLENSGWLSLVLNSLNASCVVAQCLDQEGSPVLVHGAKGLDSTLIVTSLVQIILNPDCRTV 423
            ||.|.||:||||.::...|..:..:.:||:.:...||:......|...:::||||::::..|||.
  Rat   353 KWFSLLESSGWLDIIRRCLKRAIEIIECLEAQNMNVLLLEENASDLCCLLSSLVQVMMDAHCRTW 417

  Fly   424 RGLQALIEREWIQAGHPFASRHRYSCYTPNQTRNKTSGATFVLFLDCIYQLYTQFPCSFEFSTQL 488
            .|.|:||::||:..||.|..|    |...:|: :|.....|:|||||::||..|.|.:|||:...
  Rat   418 TGFQSLIQKEWVMGGHSFLDR----CNHLHQS-DKEEVPVFLLFLDCVWQLVHQHPPAFEFTETY 477

  Fly   489 LILLFEHSHFSQYGTFLCDSERE------RNELNVHTRTTSL-----WSYLNRPDVLQTFLNPLY 542
            |.:|.:..:...:.||..:|..:      |..|:..::..:|     ||....|.......||||
  Rat   478 LTVLSDSLYIPIFSTFFFNSPHQKDTNMGRESLDAQSKPLTLLTVWDWSVQFEPKAQTLLRNPLY 542

  Fly   543 ---------------------------------------EPNANVI------------------- 549
                                                   |...::|                   
  Rat   543 VEKPKLDKGQRKGSRFKHQRQLSLPLTQSKSSPKRGFFREETDHLIKNLLGKRISKLINSSDDLQ 607

  Fly   550 ---------W------------PSVAPISLELWSDLYLRWVIDQR----SSVTVMSQIQELVTRE 589
                     |            |.:....:::|:..||||:.:.:    ..|..|.::.|::.  
  Rat   608 DNSREFYDNWHSKPTDYHGLLLPHIEGPEIKVWAQRYLRWIPEAQILGGGRVATMGKLLEMME-- 670

  Fly   590 KELRTQALKLRKQAMELGQEVSNLMKSG 617
               ..|:|:.:.:|....||..::...|
  Rat   671 ---EVQSLQEKIEARHHRQEAIHVQAPG 695

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5026NP_001163392.1 PH-GRAM_MTMR9 1..106 CDD:275398 13/55 (24%)
Myotub-related 117..511 CDD:284109 93/401 (23%)
Mtmr12XP_006232108.1 PH-like 26..192 CDD:302622 21/103 (20%)
PTPc 211..497 CDD:304379 84/328 (26%)
3-PAP 562..686 CDD:289355 15/128 (12%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166349498
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1089
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.740

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