DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5026 and Mtmr12

DIOPT Version :10

Sequence 1:NP_648271.3 Gene:CG5026 / 39026 FlyBaseID:FBgn0035945 Length:620 Species:Drosophila melanogaster
Sequence 2:NP_001401964.1 Gene:Mtmr12 / 310155 RGDID:1307902 Length:748 Species:Rattus norvegicus


Alignment Length:677 Identity:137/677 - (20%)
Similarity:248/677 - (36%) Gaps:212/677 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 IDCVE---------KKPSLSQNIVVGGIITLKCKDLRIISLEIKCGKEFFNVAASLEALSAI--- 111
            :.||:         |||...|.......:.:.|||||::...::..||        |.:..|   
  Rat   113 LHCVDQIYGVFDEKKKPLFGQLKKYPEKLVIHCKDLRVLHFCLRYTKE--------EEVKRIVSG 169

  Fly   112 -----QNTELLYPFFYRPMYSILEDGYTMFRPELEFAKLISGVGMGGASSPNVANITICMPSTST 171
                 |:.:||...|   ::|              :|..:.|.    |:.|....:....|    
  Rat   170 IIHHTQSPKLLKRLF---LFS--------------YAAAVHGT----AADPRNCTVMFDTP---- 209

  Fly   172 STLTVGAGIPHPLQNGYAIEALACGVGGVGGGALQSPQASCEWRITNVNRDFSVCATYGATLIVP 236
                          ..:..|             |:..:.|.:::..:||..:.||....|..:||
  Rat   210 --------------KDWCWE-------------LERTKGSVKYKTVSVNEGYRVCDRLPAYFVVP 247

  Fly   237 KAITDEQIVLSAAFRDGGRFPVLSYRHENGATLMRSSQPLSIQGIKRCRADEAILNLVLGRSRKG 301
            ..:.::.:   ..|:..| .|:..:...||:.|::.|      .:.:.:.|.|:      :.:|.
  Rat   248 TPLLEDDV---KRFQGRG-IPIWCWSCHNGSALLKMS------ALPKEQDDSAL------QIQKS 296

  Fly   302 FIVDTWGKGKSNTETDLHYSQWKKVNRS--IGNVSSPASILDSFAR-----LIEACNDLGCSTDK 359
            |:     .|...|   :|...::.|...  ..|..|...|..|:.:     ||::.::...:..|
  Rat   297 FL-----DGIYKT---IHRPPYEMVKTEDLSSNFLSLQEIQSSYCKFKQLFLIDSSSEFWDTDVK 353

  Fly   360 WLSRLENSGWLSLVLNSLNASCVVAQCLDQEGSPVLVHGAKGLDSTLIVTSLVQIILNPDCRTVR 424
            |.|.||:||||.::...|..:..:.:||:.:...||:......|...:::||||::::..|||..
  Rat   354 WFSLLESSGWLDIIRRCLKRAIEIIECLEAQNMNVLLLEENASDLCCLLSSLVQVMMDAHCRTWT 418

  Fly   425 GLQALIEREWIQAGHPFASRHRYSCYTPNQTRNKTSGATFVLFLDCIYQLYTQFPCSFEFSTQLL 489
            |.|:||::||:..||.|..|    |...:|: :|.....|:|||||::||..|.|.:|||:...|
  Rat   419 GFQSLIQKEWVMGGHSFLDR----CNHLHQS-DKEEVPVFLLFLDCVWQLVHQHPPAFEFTETYL 478

  Fly   490 ILLFEHSHFSQYGTFLCDSERE------RNELNVHTRTTSL-----WSYLNRPDVLQTFLNPLY- 542
            .:|.:..:...:.||..:|..:      |..|:..::..:|     ||....|.......|||| 
  Rat   479 TVLSDSLYIPIFSTFFFNSPHQKDTNMGRESLDAQSKPLTLLTVWDWSVQFEPKAQTLLRNPLYV 543

  Fly   543 --------------------------------------EPNANVI-------------------- 549
                                                  |...::|                    
  Rat   544 EKPKLDKGQRKGSRFKHQRQLSLPLTQSKSSPKRGFFREETDHLIKNLLGKRISKLINSSDDLQD 608

  Fly   550 --------W------------PSVAPISLELWSDLYLRWVIDQR----SSVTVMSQIQELVTREK 590
                    |            |.:....:::|:..||||:.:.:    ..|..|.::.|::.   
  Rat   609 NSREFYDNWHSKPTDYHGLLLPHIEGPEIKVWAQRYLRWIPEAQILGGGRVATMGKLLEMME--- 670

  Fly   591 ELRTQALKLRKQAMELGQEVSNLMKSG 617
              ..|:|:.:.:|....||..::...|
  Rat   671 --EVQSLQEKIEARHHRQEAIHVQAPG 695

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5026NP_648271.3 PH-GRAM_MTMR9 1..106 CDD:275398 13/55 (24%)
Myotub-related 210..512 CDD:461958 82/314 (26%)
Mtmr12NP_001401964.1 PH-like 26..192 CDD:473070 21/103 (20%)
PTP-MTMR12 261..463 CDD:350442 61/227 (27%)
Interaction with MTM1. /evidence=ECO:0000250 450..559 28/108 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 549..576 0/26 (0%)
3-PAP 560..686 CDD:463634 15/130 (12%)

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