DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5026 and Mtmr7

DIOPT Version :9

Sequence 1:NP_001163392.1 Gene:CG5026 / 39026 FlyBaseID:FBgn0035945 Length:620 Species:Drosophila melanogaster
Sequence 2:XP_038950456.1 Gene:Mtmr7 / 306490 RGDID:1306608 Length:672 Species:Rattus norvegicus


Alignment Length:640 Identity:192/640 - (30%)
Similarity:298/640 - (46%) Gaps:134/640 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 ATVGTLCITGHHLL-LSARQETSQELWLLHKNIDCVEKKPSLSQNIVVGGIITLKCKDLRIISLE 91
            |.:|||.:|..|:: :....:|.:|.|:||..|..:||:.:.:    .|..:.::||:.:|:.|.
  Rat    35 AALGTLYLTATHVIFVENAPDTRKETWILHSQISTIEKQATTA----TGCPLLIRCKNFQIVQLV 95

  Fly    92 IKCGKEFFNVAASLEALSAIQNTELLYPFFYRPMY--SILEDGYTMFRPELEFAKLISGVGMGGA 154
            |...::..:|..||..|:.....|.||.|.:.|..  ...|.|:.:.....|:.::         
  Rat    96 IPQERDCHDVYVSLIRLARP
VRYEELYCFSFNPKLDKEEREQGWLLVDLSEEYKRM--------- 151

  Fly   155 SSPNVANITICMPSTSTSTLTVGAGIPHPLQNGYAIEALACGVGGVGGGALQSPQASCEWRITNV 219
                                    |:|    :.|                         |::::|
  Rat   152 ------------------------GLP----DNY-------------------------WQLSDV 163

  Fly   220 NRDFSVCATYGATLIVPKAITDEQIVLSAAFRDGGRFPVLSYR-HENGATLMRSSQPLSIQGIK- 282
            |||:.||.:|...|.||::.|...||.|:.||...|||.|||. .|:.|::.|||||||  |.. 
  Rat   164 NRDYRVCDSYPTELYVPRSATAHIIVGSSKFRSRRRFPALSYYCKESHASICRSSQPLS--GFSA 226

  Fly   283 RCRADEAILNLVLGRSRKG-------FIVDT-----------WGKGKSNTETDLHYSQWKKVNRS 329
            ||..||.:|..:    ||.       ::|||           .|||..|.:   :||..|.....
  Rat   227 RCLEDEQMLQAI----RKANPRSDFIYVVDTRPKLNAMANRAAGKGYENED---NYSNIKFQFIG 284

  Fly   330 IGNVSSPASILDSFARLIEACNDLGCSTDKWLSRLENSGWLSLVLNSLNASCVVAQCLDQEGSPV 394
            |.|:.   .:.:|..:::|.|.....|...:|..|||||||..:...::|...:|:.:.:||:.|
  Rat   285 IENIH---VMRNSLQKMLEVCELKSPSMSDFLWGLENSGWLRHIKAIMDAGIFIAKAVSEEGTSV 346

  Fly   395 LVHGAKGLDSTLIVTSLVQIILNPDCRTVRGLQALIEREWIQAGHPFASRHRYSCYTPNQTRNKT 459
            |||.:.|.|.|..|.|:..::|:|..||::|...|||::||..||.|  .|||.....:.   |.
  Rat   347 LVHCSDGWDRTAQVCSVASLLLDPYYRTLKGFMVLIEKDWISFGHKF--NHRYGNLDGDP---KE 406

  Fly   460 SGATFVLFLDCIYQLYTQFPCSFEFSTQLLILLFEHSHFSQYGTFLCDSERERNELNVHTRTTSL 524
            .......|::|::||..||||:|||:.:.||.:..|.:..|:|.|||:|::||.||.:..||.||
  Rat   407 ISPVIDQFIECVWQLMEQFPCAFEFNERFLIHIQHHVYSCQFGNFLCNSQKERRELKIQERTYSL 471

  Fly   525 WSYL--NRPDVLQTFLNPLYEPNANVIWPSV----AP--ISLELWSDLYLRWV--IDQRSSVT-- 577
            ||.|  ||.|    :||||:..:.:....|:    ||  .:.:.|:.:|.|:.  :..|.|||  
  Rat   472 WSNLWKNRAD----YLNPLFRADHSQTQGSLHLPTAPYNFTYKFWNGMYNRFEKGLQPRQSVTDY 532

  Fly   578 VMSQIQELVTREKELRTQALKLRK-QAMEL-GQEV----------SNLMKSGNDT 620
            :|:..:|....|:||.:...:|.| |.:.| |.:|          |....|.|.|
  Rat   533 LMAVKEESQQLEEELESLEERLEKIQKVHLNGAKVKSKQSEPSKHSGFSTSDNST 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5026NP_001163392.1 PH-GRAM_MTMR9 1..106 CDD:275398 22/78 (28%)
Myotub-related 117..511 CDD:284109 124/415 (30%)
Mtmr7XP_038950456.1 PH-like 21..115 CDD:418428 24/83 (29%)
PTP-MTMR7 144..445 CDD:350431 112/379 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166349494
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1089
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192248at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.750

Return to query results.
Submit another query.