DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5026 and Mtm1

DIOPT Version :10

Sequence 1:NP_648271.3 Gene:CG5026 / 39026 FlyBaseID:FBgn0035945 Length:620 Species:Drosophila melanogaster
Sequence 2:NP_001013065.2 Gene:Mtm1 / 288762 RGDID:1304582 Length:603 Species:Rattus norvegicus


Alignment Length:596 Identity:158/596 - (26%)
Similarity:249/596 - (41%) Gaps:163/596 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 SGATVGTLCITGHHLLL-SARQETSQELWLLHKNIDCVEKKPSLSQNIVVGGI---------ITL 80
            ||...|.|.||.:.|.| |...:.:..|.:....|..:||         :||:         :.:
  Rat    56 SGPVKGRLYITNYRLYLRSLETDLAPILDVPLGVISRIEK---------MGGVTSRGENSYGLDI 111

  Fly    81 KCKDLRIISLEIK----CGKEFFNVAASLEALSAIQNTELLYPFFYR-PMYSILE------DGYT 134
            .|||||.:...:|    ..::.|:|.           |...:|..|. |:::.:.      ||:.
  Rat   112 TCKDLRNLRFALKQEGHSRRDIFDVL-----------TRHAFPLAYNLPLFAFVNEEKFKVDGWA 165

  Fly   135 MFRPELEFAKLISGVGMGGASSPNVANITICMPSTSTSTLTVGAGIPHPLQNGYAIEALACGVGG 199
            ::.|..|:.:                                 .|:|                  
  Rat   166 IYNPVEEYRR---------------------------------QGLP------------------ 179

  Fly   200 VGGGALQSPQASCEWRITNVNRDFSVCATYGATLIVPKAITDEQIVLSAAFRDGGRFPVLSYRH- 263
                       ...|||:.||:.:.:|.||.|.|:||...:|:.:...|.||...|.||||:.| 
  Rat   180 -----------DRHWRISFVNQRYELCDTYPALLVVPYRASDDDLRRVATFRSRNRIPVLSWIHP 233

  Fly   264 ENGATLMRSSQPLSIQGIKRCRADEAILNLVLGRSR---KGFIVD-----------TWGKGKSNT 314
            ||.|.:||.||||...|.||.|.||..|:::...::   |..|.|           ..|.|....
  Rat   234 ENRAAIMRCSQPLVGVGGKRSRDDERYLDIIRETNKQTSKLTIYDARPGVNAVANKATGGGYEGE 298

  Fly   315 ETDLHYSQWKKVNRSIGNVSSPASILDSFARL-------IEACNDLGCSTDKWLSRLENSGWLSL 372
            :...|      ...|..::.:...:.:|..|:       :|..:        |||.||::.||..
  Rat   299 DAYPH------AELSFLDIHNIHVMRESLRRVRDIVYPHVEEAH--------WLSSLESTHWLEH 349

  Fly   373 VLNSLNASCVVAQCLDQEGSPVLVHGAKGLDSTLIVTSLVQIILNPDCRTVRGLQALIEREWIQA 437
            :...|..:..||..:....|.||||.:.|.|.|..:|:|..::|:...|::.|.:.|:::|||..
  Rat   350 IKLLLTGAIRVADKVASGLSSVLVHCSDGWDRTAQLTTLAMLMLDGFYRSIEGFEILVQKEWISF 414

  Fly   438 GHPFASR-------HRYSCYTPNQTRNKTSGATFVLFLDCIYQLYTQFPCSFEFSTQLLILLFEH 495
            ||.|:||       |..:..:|          .|:.|:||::|:..|||.:|||:...|:.:.:|
  Rat   415 GHKFSSRIGHGDKNHADADRSP----------IFLQFIDCVWQMTKQFPTAFEFNECFLVAILDH 469

  Fly   496 SHFSQYGTFL--CDSERERNELNVHTRTTSLWSYLNRPDVLQTFLNPLYEPNAN-VIWPSVAPIS 557
            .:..::||||  |::.|||..|  ..||.|:||.:|...  ..|.||.|...:| ||:|..:...
  Rat   470 LYSCRFGTFLLNCEAARERQRL--AERTVSVWSLINSNK--DEFTNPFYARESNRVIYPVTSVRH 530

  Fly   558 LELWSDLYLRW 568
            ||||.:.|:||
  Rat   531 LELWVNYYIRW 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5026NP_648271.3 PH-GRAM_MTMR9 1..106 CDD:275398 23/93 (25%)
Myotub-related 210..512 CDD:461958 101/332 (30%)
Mtm1NP_001013065.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..40
PH-like 44..143 CDD:473070 24/106 (23%)
Myotub-related 162..489 CDD:461958 108/412 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 579..603
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.