DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5026 and Mtmr4

DIOPT Version :9

Sequence 1:NP_001163392.1 Gene:CG5026 / 39026 FlyBaseID:FBgn0035945 Length:620 Species:Drosophila melanogaster
Sequence 2:NP_001099297.4 Gene:Mtmr4 / 287607 RGDID:1310306 Length:1191 Species:Rattus norvegicus


Alignment Length:593 Identity:149/593 - (25%)
Similarity:237/593 - (39%) Gaps:182/593 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 IDCVEKKPSLSQNIVVGGIITLKCKDLRIISLEIKCGKEFFNVAASLEALSAIQNT-------EL 116
            ||.||.:.....:|.        |||.::    ::|  .|.......|.||.:...       |.
  Rat    76 IDSVESRDMFQLHIA--------CKDSKV----VRC--HFSTFKQCQEWLSRLSRATARPAKPED 126

  Fly   117 LYPFFYRPMYSIL--EDGYTMF---------RPELEFAKLISGVGMGGASSPNVANITICMPSTS 170
            |:.|.|......|  ||.:|..         |.|.|.|::       |....||           
  Rat   127 LFAFAYHAWCLGLTEEDQHTHLCQPGEHIRCRQEAELARM-------GFDLQNV----------- 173

  Fly   171 TSTLTVGAGIPHPLQNGYAIEALACGVGGVGGGALQSPQASCEWRITNVNRDFSVCATYGATLIV 235
                                                       ||::::|.::.:|.:|...|:|
  Rat   174 -------------------------------------------WRVSHINSNYKLCPSYPQKLLV 195

  Fly   236 PKAITDEQIVLSAAFRDGGRFPVLSYRH-ENGATLMRSSQP------------------------ 275
            |..|||:::...|:||...|.||:.||| .|||.:.|.|||                        
  Rat   196 PVWITDKELENVASFRSWKRIPVVVYRHLRNGAAIARCSQPEISWWGWRNADDEYLVTSIAKACA 260

  Fly   276 -------------------------------LSIQGIKRCRADEAILNL--------VLGRSRKG 301
                                           .:..|::...|.:.:|.|        |..|::.|
  Rat   261 LDPGTRASGGSLSAGTNDASEACDTDFDSSLTACSGVESTAAPQKLLILDARSYTAAVANRAKGG 325

  Fly   302 FIVDTWGKGKSNTETDLHYSQWKKVNRSIGNVSSPASILDSFARLIEACNDLGCSTDKWLSRLEN 366
                       ..|.:.:|...:.|...:.|:.   :|.:||..|...|:.:. ....|||.||:
  Rat   326 -----------GCECEEYYPNCEVVFMGMANIH---AIRNSFQYLRAVCSQMP-DPSNWLSALES 375

  Fly   367 SGWLSLVLNSLNASCVVAQCLDQEGSPVLVHGAKGLDSTLIVTSLVQIILNPDCRTVRGLQALIE 431
            :.||..:...|.|:.:||..:|:||.|||||.:.|.|.|..:.:|.:|:|:|..||:.|.|.|:|
  Rat   376 TKWLQHLSVMLKAAVLVANTVDREGRPVLVHCSDGWDRTPQIVALAKILLDPYYRTLEGFQVLVE 440

  Fly   432 REWIQAGHPFASR--HRYSCYTPNQTRNKTSGATFVLFLDCIYQLYTQFPCSFEFSTQLLILLFE 494
            .:|:..||.|..|  |:.:....|:     ....|:.:||.::||..||||.|||:...|:.|.:
  Rat   441 SDWLDFGHKFGDRCGHQENAEDQNE-----QCPVFLQWLDSVHQLLKQFPCLFEFNEAFLVKLVQ 500

  Fly   495 HSHFSQYGTFLCDSERERNELNVHTRTTSLWSYLNRPDVLQTFLNPLYEPNANVIWPSVAPI-SL 558
            |::...|||||.::..||.:.|::.||.|:|:.|...:  :.|.|.||.|.::::...|..: :|
  Rat   501 HTYSCLYGTFLANNPCEREKRNIYKRTCSVWALLRAGN--KNFHNFLYTPGSDMVLHPVCHVRAL 563

  Fly   559 ELWSDLYL 566
            .||:.:||
  Rat   564 HLWTAVYL 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5026NP_001163392.1 PH-GRAM_MTMR9 1..106 CDD:275398 10/46 (22%)
Myotub-related 117..511 CDD:284109 116/470 (25%)
Mtmr4NP_001099297.4 PH-GRAM_MTMR4 23..136 CDD:270150 17/73 (23%)
Myotub-related 127..519 CDD:284109 117/472 (25%)
FYVE_MTMR4 1107..1166 CDD:277272
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166349513
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D824298at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.850

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