DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5026 and Mtmr4

DIOPT Version :10

Sequence 1:NP_648271.3 Gene:CG5026 / 39026 FlyBaseID:FBgn0035945 Length:620 Species:Drosophila melanogaster
Sequence 2:NP_001099297.4 Gene:Mtmr4 / 287607 RGDID:1310306 Length:1191 Species:Rattus norvegicus


Alignment Length:593 Identity:149/593 - (25%)
Similarity:237/593 - (39%) Gaps:182/593 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 IDCVEKKPSLSQNIVVGGIITLKCKDLRIISLEIKCGKEFFNVAASLEALSAIQNT-------EL 116
            ||.||.:.....:|.        |||.::    ::|  .|.......|.||.:...       |.
  Rat    76 IDSVESRDMFQLHIA--------CKDSKV----VRC--HFSTFKQCQEWLSRLSRATARPAKPED 126

  Fly   117 LYPFFYRPMYSIL--EDGYTMF---------RPELEFAKLISGVGMGGASSPNVANITICMPSTS 170
            |:.|.|......|  ||.:|..         |.|.|.|::       |....||           
  Rat   127 LFAFAYHAWCLGLTEEDQHTHLCQPGEHIRCRQEAELARM-------GFDLQNV----------- 173

  Fly   171 TSTLTVGAGIPHPLQNGYAIEALACGVGGVGGGALQSPQASCEWRITNVNRDFSVCATYGATLIV 235
                                                       ||::::|.::.:|.:|...|:|
  Rat   174 -------------------------------------------WRVSHINSNYKLCPSYPQKLLV 195

  Fly   236 PKAITDEQIVLSAAFRDGGRFPVLSYRH-ENGATLMRSSQP------------------------ 275
            |..|||:::...|:||...|.||:.||| .|||.:.|.|||                        
  Rat   196 PVWITDKELENVASFRSWKRIPVVVYRHLRNGAAIARCSQPEISWWGWRNADDEYLVTSIAKACA 260

  Fly   276 -------------------------------LSIQGIKRCRADEAILNL--------VLGRSRKG 301
                                           .:..|::...|.:.:|.|        |..|::.|
  Rat   261 LDPGTRASGGSLSAGTNDASEACDTDFDSSLTACSGVESTAAPQKLLILDARSYTAAVANRAKGG 325

  Fly   302 FIVDTWGKGKSNTETDLHYSQWKKVNRSIGNVSSPASILDSFARLIEACNDLGCSTDKWLSRLEN 366
                       ..|.:.:|...:.|...:.|:.   :|.:||..|...|:.:. ....|||.||:
  Rat   326 -----------GCECEEYYPNCEVVFMGMANIH---AIRNSFQYLRAVCSQMP-DPSNWLSALES 375

  Fly   367 SGWLSLVLNSLNASCVVAQCLDQEGSPVLVHGAKGLDSTLIVTSLVQIILNPDCRTVRGLQALIE 431
            :.||..:...|.|:.:||..:|:||.|||||.:.|.|.|..:.:|.:|:|:|..||:.|.|.|:|
  Rat   376 TKWLQHLSVMLKAAVLVANTVDREGRPVLVHCSDGWDRTPQIVALAKILLDPYYRTLEGFQVLVE 440

  Fly   432 REWIQAGHPFASR--HRYSCYTPNQTRNKTSGATFVLFLDCIYQLYTQFPCSFEFSTQLLILLFE 494
            .:|:..||.|..|  |:.:....|:     ....|:.:||.::||..||||.|||:...|:.|.:
  Rat   441 SDWLDFGHKFGDRCGHQENAEDQNE-----QCPVFLQWLDSVHQLLKQFPCLFEFNEAFLVKLVQ 500

  Fly   495 HSHFSQYGTFLCDSERERNELNVHTRTTSLWSYLNRPDVLQTFLNPLYEPNANVIWPSVAPI-SL 558
            |::...|||||.::..||.:.|::.||.|:|:.|...:  :.|.|.||.|.::::...|..: :|
  Rat   501 HTYSCLYGTFLANNPCEREKRNIYKRTCSVWALLRAGN--KNFHNFLYTPGSDMVLHPVCHVRAL 563

  Fly   559 ELWSDLYL 566
            .||:.:||
  Rat   564 HLWTAVYL 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5026NP_648271.3 PH-GRAM_MTMR9 1..106 CDD:275398 10/46 (22%)
Myotub-related 210..512 CDD:461958 102/367 (28%)
Mtmr4NP_001099297.4 PH-GRAM_MTMR4 23..136 CDD:270150 17/73 (23%)
PTP-MTMR4 172..479 CDD:350435 87/380 (23%)
FYVE_MTMR4 1107..1166 CDD:277272
Blue background indicates that the domain is not in the aligned region.

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