DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5026 and mtm-6

DIOPT Version :10

Sequence 1:NP_648271.3 Gene:CG5026 / 39026 FlyBaseID:FBgn0035945 Length:620 Species:Drosophila melanogaster
Sequence 2:NP_871680.1 Gene:mtm-6 / 176757 WormBaseID:WBGene00003478 Length:782 Species:Caenorhabditis elegans


Alignment Length:652 Identity:178/652 - (27%)
Similarity:288/652 - (44%) Gaps:145/652 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LDGVLLHDPSNAGASGATVGTLCITGHHLLLSARQETSQELWLLHKNIDCVEKKPSLSQNIVVGG 76
            :|.|.|.|  ..|.....|||:.:|..|::..| :..|:||||....|..|||    ......|.
 Worm   117 VDKVCLVD--RLGCQENLVGTVHVTTTHIIFRA-ENGSKELWLATGLISSVEK----GTLTAAGC 174

  Fly    77 IITLKCKDLRIISLEIKCGKEFFNVAASLEALSAIQNTELLYPFFYRPMYSILEDGYTMFRPELE 141
            ::.::||..::|:|.|...|.                        .:.:|..|:           
 Worm   175 MLVIRCKHFQVITLLISRDKS------------------------CQDLYETLQ----------- 204

  Fly   142 FAKLISGVGMGGASSPNVANITICMPSTSTSTLTVGAGIPHPLQNGYAIEALACGVGGVGGGALQ 206
                       .|:.|...|:|..:...:.          .|:::......|.........|..:
 Worm   205 -----------RAAKPVSVNVTELLAFENR----------EPVEDVRGWRRLDWNSEMTRQGITK 248

  Fly   207 SPQASCEWRITNVNRDFSVCATYGATLIVPKAITDEQIVLSAAFRDGGRFPVLSYRH-ENGATLM 270
            |     :|..:|:|..:::|.||...|..|.|.:...::.|..||..||.|||:|.| :..|.|.
 Worm   249 S-----QWTESNINEGYTICDTYPNKLWFPTAASTSVLLGSCKFRSRGRLPVLTYFHQQTEAALC 308

  Fly   271 RSSQPLSIQGIK-RCRADEAILNLVLGRSRKG----FIVDT-----------WGKGKSNTETDLH 319
            |.:|||:  |.. ||..||.::.|| |::...    |:|||           .|||   .|.:.:
 Worm   309 RCAQPLT--GFSARCVEDEKLMELV-GKANTNSDNLFLVDTRPRVNAMVNKVQGKG---FEDERN 367

  Fly   320 YSQWKKVNRSIGNV----SSPASILDSFARLIEACNDLGCSTDKWLSRLENSGWLSLVLNSLNAS 380
            ||..:.....|.|:    :|.|.:||:    :..|.|:   |:.| ..||.||||..|.:.:..|
 Worm   368 YSNMRFHFFDIENIHVMRASQARLLDA----VTKCRDV---TEYW-KTLEASGWLKHVRSVVECS 424

  Fly   381 CVVAQCLDQEGSPVLVHGAKGLDSTLIVTSLVQIILNPDCRTVRGLQALIEREWIQAGHPFASRH 445
            ..:|:.:.: |:..:||.:.|.|.|..|.:|.|::|:|..||:.|.|.|||::|:..||.|..| 
 Worm   425 LFLAESISR-GTSCVVHCSDGWDRTSQVVALCQLLLDPYYRTIHGFQVLIEKDWLGFGHKFDDR- 487

  Fly   446 RYSC---YTPNQTRNKTSGATFVLFLDCIYQLYTQFPCSFEFSTQLLILLFEHSHFSQYGTFLCD 507
               |   ...|....|.....|..:||||:|:..|.|.:|:|:.:.||.:.||.:..|:|||:.:
 Worm   488 ---CGHVGALNDEAGKEVSPIFTQWLDCIWQIMQQKPRAFQFNERYLIEMHEHVYSCQFGTFIGN 549

  Fly   508 SERERNELNVHTRTTSLWSYLN-RPDVLQTFLNPLYEPNANVIWPSVAPISLE-------LWSDL 564
            .:::|.:||:..||.|||:::: |.|   .::||.|.|.|:     ||.:.|:       :|:.:
 Worm   550 CDKDRRDLNLSKRTKSLWTWMDARHD---DYMNPFYSPTAH-----VALLDLDTRAARFTVWTAM 606

  Fly   565 YLRW-------------VIDQRSSVTVM-SQIQELVTREKELRTQALKLRKQAMELGQEVSNLMK 615
            |.|:             .:.....|.|: |.:.:|.||..||:||    :.|.:......:|::.
 Worm   607 YNRFDNGLQPRERLEDLTMAAMEHVGVLESHVAQLRTRLAELKTQ----QNQQITSTNTPTNMVD 667

  Fly   616 SG 617
            ||
 Worm   668 SG 669

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5026NP_648271.3 PH-GRAM_MTMR9 1..106 CDD:275398 27/93 (29%)
Myotub-related 210..512 CDD:461958 106/325 (33%)
mtm-6NP_871680.1 PH-like 117..209 CDD:473070 30/144 (21%)
PTP-MTMR6-like 237..540 CDD:350380 104/326 (32%)
FYVE 724..782 CDD:214499
Blue background indicates that the domain is not in the aligned region.

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