DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5026 and mtm-1

DIOPT Version :10

Sequence 1:NP_648271.3 Gene:CG5026 / 39026 FlyBaseID:FBgn0035945 Length:620 Species:Drosophila melanogaster
Sequence 2:NP_491531.2 Gene:mtm-1 / 172148 WormBaseID:WBGene00003475 Length:588 Species:Caenorhabditis elegans


Alignment Length:644 Identity:158/644 - (24%)
Similarity:258/644 - (40%) Gaps:163/644 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 GASGATVGTLCITGHHLL-LSARQETSQELWLLH---KNIDCVEKKPSLSQNIVVGGI----ITL 80
            |..|...|.:.||.:.:: |........|.|.|.   ..:..:||....:.::...|.    .|:
 Worm    45 GPLGKFPGKIVITRYRMVFLVGDGGKMYEQWKLDIPLGQVSRIEKVGRKTTSVAKRGDDNYGFTI 109

  Fly    81 KCKDLRIISLEIK-CGKEFFNVAASLEALSAIQNTELLYPFFYR-PMYS---------ILEDGYT 134
            .|||.|:...... ...:..||..||...:        :|..:. ||::         :::||:.
 Worm   110 YCKDYRVYRFTCNPASSDRKNVCDSLNRYA--------FPLSHNLPMFASVHAAETPRLMKDGWK 166

  Fly   135 MFRPELEFAKLISGVGMGGASSPNVANITICMPSTSTSTLTVGAGIPHPLQNGYAIEALACGVGG 199
            ::..|.|:.:|                                 |||:                 
 Worm   167 IYSAEKEYERL---------------------------------GIPN----------------- 181

  Fly   200 VGGGALQSPQASCEWRITNVNRDFSVCATYGATLIVPKAITDEQ---IVLSAAFRDGGRFPVLSY 261
                       |..|:..::|:|:....||..|.::|....:|.   :.....||...|.||||:
 Worm   182 -----------SRLWKEVDINKDYKFSETYPRTFVIPTVSWEEGKPFVKKLGEFRSKERIPVLSW 235

  Fly   262 RHENG-ATLMRSSQPLS-IQGIKRCRADEAILNLVLGRS---RKGFIVDTWGKGKSNTETDLHYS 321
            .::.. |::.|.|||:: |.| ||...||..|..::..:   |:..|:|  .:...|.       
 Worm   236 INQTTLASISRCSQPMTGISG-KRSAEDERHLTNIMNANANCRELLILD--ARPAVNA------- 290

  Fly   322 QWKKVNRSIGN------VSSPASIL---------DSFARLIEA----CNDLGCSTDKWLSRLENS 367
               |:|::.|.      |::|.:.|         ||..||:.|    .::.|     :...|:.|
 Worm   291 ---KLNKAKGGGYEENYVNAPLTFLNIHNIHVVRDSLKRLLAALIPRVDEKG-----YYKALDES 347

  Fly   368 GWLSLVLNSLNASCVVAQCLDQEGSPVLVHGAKGLDSTLIVTSLVQIILNPDCRTVRGLQALIER 432
            .||:.|.:.|..:......:|.|...||:|.:.|.|.|..:|||..|.|:...||:.|...|||:
 Worm   348 KWLNHVQSILEGAVKAVFNVDTEKQSVLIHCSDGWDRTAQLTSLAMIQLDSYYRTIEGFIVLIEK 412

  Fly   433 EWIQAGHPFASR--HRYSCYTPNQTRNKTSGATFVLFLDCIYQLYTQFPCSFEFSTQLLILLFEH 495
            ||...||.|..|  |....|:..:     ....||.|.||::|:..|||.:|||:.:|||.:.:.
 Worm   413 EWCSFGHKFGERIGHGDDNYSDGE-----RSPVFVQFCDCLWQIMRQFPWAFEFTQELLICMLDE 472

  Fly   496 SHFSQYGTFLCDSERER-NELNVHTRTTSLWSYL--NRPDVLQTFLNPLYEP-------NANVIW 550
            .:..:|||||.:||:.| .:......|.|.|||:  |:    :.|.||:::.       |.|   
 Worm   473 LYACRYGTFLYNSEKIRLKDKKCDETTISFWSYVLENK----KKFRNPMFKHGKSNKVINVN--- 530

  Fly   551 PSVAPISLELWSDLYLR---WVIDQRSSVTVMSQIQELVTREKELRTQALKLRKQAMEL 606
            ||:.  .|.:|.|.|.|   :|:..... .|.....:.|..:|:|..:.:.|...|.:|
 Worm   531 PSLC--GLHVWIDYYARSNPYVVTPNHE-DVQQPGAQFVDEKKQLLDEIMALDDAAQKL 586

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5026NP_648271.3 PH-GRAM_MTMR9 1..106 CDD:275398 20/90 (22%)
Myotub-related 210..512 CDD:461958 99/330 (30%)
mtm-1NP_491531.2 PH-GRAM_MTM-like 36..141 CDD:275407 21/103 (20%)
Myotub-related 163..489 CDD:461958 107/409 (26%)

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