DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5026 and mtm-1

DIOPT Version :9

Sequence 1:NP_001163392.1 Gene:CG5026 / 39026 FlyBaseID:FBgn0035945 Length:620 Species:Drosophila melanogaster
Sequence 2:NP_491531.2 Gene:mtm-1 / 172148 WormBaseID:WBGene00003475 Length:588 Species:Caenorhabditis elegans


Alignment Length:644 Identity:158/644 - (24%)
Similarity:258/644 - (40%) Gaps:163/644 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 GASGATVGTLCITGHHLL-LSARQETSQELWLLH---KNIDCVEKKPSLSQNIVVGGI----ITL 80
            |..|...|.:.||.:.:: |........|.|.|.   ..:..:||....:.::...|.    .|:
 Worm    45 GPLGKFPGKIVITRYRMVFLVGDGGKMYEQWKLDIPLGQVSRIEKVGRKTTSVAKRGDDNYGFTI 109

  Fly    81 KCKDLRIISLEIK-CGKEFFNVAASLEALSAIQNTELLYPFFYR-PMYS---------ILEDGYT 134
            .|||.|:...... ...:..||..||...:        :|..:. ||::         :::||:.
 Worm   110 YCKDYRVYRFTCNPASSDRKNVCDSLNRYA--------FP
LSHNLPMFASVHAAETPRLMKDGWK 166

  Fly   135 MFRPELEFAKLISGVGMGGASSPNVANITICMPSTSTSTLTVGAGIPHPLQNGYAIEALACGVGG 199
            ::..|.|:.:|                                 |||:                 
 Worm   167 IYSAEKEYERL---------------------------------GIPN----------------- 181

  Fly   200 VGGGALQSPQASCEWRITNVNRDFSVCATYGATLIVPKAITDEQ---IVLSAAFRDGGRFPVLSY 261
                       |..|:..::|:|:....||..|.::|....:|.   :.....||...|.||||:
 Worm   182 -----------SRLWKEVDINKDYKFSETYPRTFVIPTVSWEEGKPFVKKLGEFRSKERIPVLSW 235

  Fly   262 RHENG-ATLMRSSQPLS-IQGIKRCRADEAILNLVLGRS---RKGFIVDTWGKGKSNTETDLHYS 321
            .::.. |::.|.|||:: |.| ||...||..|..::..:   |:..|:|  .:...|.       
 Worm   236 INQTTLASISRCSQPMTGISG-KRSAEDERHLTNIMNANANCRELLILD--ARPAVNA------- 290

  Fly   322 QWKKVNRSIGN------VSSPASIL---------DSFARLIEA----CNDLGCSTDKWLSRLENS 367
               |:|::.|.      |::|.:.|         ||..||:.|    .::.|     :...|:.|
 Worm   291 ---KLNKAKGGGYEENYVNAPLTFLNIHNIHVVRDSLKRLLAALIPRVDEKG-----YYKALDES 347

  Fly   368 GWLSLVLNSLNASCVVAQCLDQEGSPVLVHGAKGLDSTLIVTSLVQIILNPDCRTVRGLQALIER 432
            .||:.|.:.|..:......:|.|...||:|.:.|.|.|..:|||..|.|:...||:.|...|||:
 Worm   348 KWLNHVQSILEGAVKAVFNVDTEKQSVLIHCSDGWDRTAQLTSLAMIQLDSYYRTIEGFIVLIEK 412

  Fly   433 EWIQAGHPFASR--HRYSCYTPNQTRNKTSGATFVLFLDCIYQLYTQFPCSFEFSTQLLILLFEH 495
            ||...||.|..|  |....|:..:     ....||.|.||::|:..|||.:|||:.:|||.:.:.
 Worm   413 EWCSFGHKFGERIGHGDDNYSDGE-----RSPVFVQFCDCLWQIMRQFPWAFEFTQELLICMLDE 472

  Fly   496 SHFSQYGTFLCDSERER-NELNVHTRTTSLWSYL--NRPDVLQTFLNPLYEP-------NANVIW 550
            .:..:|||||.:||:.| .:......|.|.|||:  |:    :.|.||:::.       |.|   
 Worm   473 LYACRYGTFLYNSEKIRLKDKKCDETTISFWSYVLENK----KKFRNPMFKHGKSNKVINVN--- 530

  Fly   551 PSVAPISLELWSDLYLR---WVIDQRSSVTVMSQIQELVTREKELRTQALKLRKQAMEL 606
            ||:.  .|.:|.|.|.|   :|:..... .|.....:.|..:|:|..:.:.|...|.:|
 Worm   531 PSLC--GLHVWIDYYARSNPYVVTPNHE-DVQQPGAQFVDEKKQLLDEIMALDDAAQKL 586

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5026NP_001163392.1 PH-GRAM_MTMR9 1..106 CDD:275398 20/90 (22%)
Myotub-related 117..511 CDD:284109 110/432 (25%)
mtm-1NP_491531.2 PH-GRAM_MTM-like 36..141 CDD:275407 21/103 (20%)
Myotub-related 148..487 CDD:284109 107/422 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D824298at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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