DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5026 and mtmr8

DIOPT Version :9

Sequence 1:NP_001163392.1 Gene:CG5026 / 39026 FlyBaseID:FBgn0035945 Length:620 Species:Drosophila melanogaster
Sequence 2:XP_004915812.2 Gene:mtmr8 / 100489239 XenbaseID:XB-GENE-948866 Length:676 Species:Xenopus tropicalis


Alignment Length:623 Identity:186/623 - (29%)
Similarity:282/623 - (45%) Gaps:125/623 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IKTPKLDGVLLHD------PSNAGASGATVGTLCITGHHLL-----LSARQETSQELWLLHKNID 60
            |.|||::.|.|.|      |:        ||||.:|..||:     :.||:||    |:.|.:|.
 Frog     4 ISTPKVENVKLFDRYTNKRPA--------VGTLYLTATHLIYVESGVGARKET----WIPHHHIS 56

  Fly    61 CVEKKPSLSQNIVVGGIITLKCKDLRIISLEIKCGKEFFNVAASLEALSAIQNTELLYPFFYRPM 125
            .|||   |:.| ..|..:.::||:.|.....|:..::...|..||..||.....|.||.|.|.|.
 Frog    57 LVEK---LALN-TTGCPLVIRCKNFRAAHFVIQRERDCHKVYTSLLKLSQP
AKYEDLYAFSYNPS 117

  Fly   126 YSILED--GYTMFRPELEFAKLISGVGMGGASSPNVANITICMPSTSTSTLTVGAGIPHPLQNGY 188
            :...|.  |:.....|:||.::                                 |||:..    
 Frog   118 HDKDERAVGWKQVDLEVEFLRM---------------------------------GIPNEF---- 145

  Fly   189 AIEALACGVGGVGGGALQSPQASCEWRITNVNRDFSVCATYGATLIVPKAITDEQIVLSAAFRDG 253
                                     |::|::|:|:.||:||...|:|||...:..|:.||.||..
 Frog   146 -------------------------WKLTDLNKDYKVCSTYPTCLVVPKEANEATILGSAKFRSR 185

  Fly   254 GRFPVLSYR-HENGATLMRSSQPLSIQGIK-RCRADEAILNLVLGRSRKG----FIVDT------ 306
            ||||||||. .:|.|.:.|.|||||  |.. ||..||.:|. .:|::..|    ::|||      
 Frog   186 GRFPVLSYYFKDNNAVICRCSQPLS--GFSARCEDDEKMLE-TIGKANPGSPFMYVVDTRPKLNA 247

  Fly   307 -----WGKGKSNTETDLHYSQWKKVNRSIGNVSSPASILDSFARLIEACNDLGCSTDKWLSRLEN 366
                 .|||..|.:      .:..:......:.:...:.:|..:|:|.|.....|...:|:.|||
 Frog   248 MANRAAGKGYENED------NYPNIRFKFIGIENIHVMRNSLQKLLEVCEMKSPSMSNFLTVLEN 306

  Fly   367 SGWLSLVLNSLNASCVVAQCLDQEGSPVLVHGAKGLDSTLIVTSLVQIILNPDCRTVRGLQALIE 431
            ||||..:...::|...:|:.:..|.:.||||.:.|.|.|..|.||..|:|:|..||::|...|||
 Frog   307 SGWLRHIKAVMDAGVFLAKVVQDENASVLVHCSDGWDRTAQVCSLASILLDPFYRTIKGFMFLIE 371

  Fly   432 REWIQAGHPFASRHRYSCYTPNQTRNKTSGATFVLFLDCIYQLYTQFPCSFEFSTQLLILLFEHS 496
            :|||..||.|..|..:....|     |.....|..|::|::.|..||||:||||.:.|:.:.:|.
 Frog   372 KEWISLGHKFTQRCGHLDVDP-----KEVSPVFTQFVECVWHLTEQFPCAFEFSERFLLEIHDHI 431

  Fly   497 HFSQYGTFLCDSERERNELNVHTRTTSLWSYLNRPDVLQTFLNPLYEPNA-NVIWPSVAPISLEL 560
            ...|:|.|:.:|::||.||.:..||.|||.:|.:..  |.|:||||...| ..:.|...|.:.:.
 Frog   432 FSCQFGNFIGNSQKEREELKIFERTHSLWQFLLQRK--QEFVNPLYTHLAYKTLRPITLPFTFKF 494

  Fly   561 WSDLYLRWVIDQRSSVTVMSQIQELVTREKELRTQALK 598
            |..:|.|:.........|:..:.|.:.::..|....::
 Frog   495 WCGMYNRFDKGMHPRQCVLDYLLECMNKKAALEKSEIE 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5026NP_001163392.1 PH-GRAM_MTMR9 1..106 CDD:275398 34/109 (31%)
Myotub-related 117..511 CDD:284109 123/412 (30%)
mtmr8XP_004915812.2 PH-like 1..103 CDD:418428 37/114 (32%)
PTP-MTMR8 126..433 CDD:350432 113/382 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192248at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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