DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5026 and mtmr10

DIOPT Version :9

Sequence 1:NP_001163392.1 Gene:CG5026 / 39026 FlyBaseID:FBgn0035945 Length:620 Species:Drosophila melanogaster
Sequence 2:NP_001123828.1 Gene:mtmr10 / 100170581 XenbaseID:XB-GENE-1002518 Length:764 Species:Xenopus tropicalis


Alignment Length:758 Identity:165/758 - (21%)
Similarity:276/758 - (36%) Gaps:270/758 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KTPKLDGVLLHDPSNAGASGATVGTLCITGHHLLLSARQETSQ-ELW------------------ 53
            |..||..|||  |.....:.......||.         .:||| :||                  
 Frog    29 KIKKLKPVLL--PGEIVVNEVNFVRKCIA---------SDTSQYDLWGKLVCTNFKISFITENSV 82

  Fly    54 ----LLHKN---------IDCVE----------KKPSLSQN---------IVVGGIITLKCKDLR 86
                ..:||         :.|:|          |:..||.|         :::      .|||.|
 Frog    83 PFQRFHYKNLLLGEHDVPLTCIEQIVVVNDTKRKQKILSHNQKLKFNPTELII------YCKDFR 141

  Fly    87 IISLEI-KCGKEFF-NVAASLEALSAIQNTELLYPFFY-RPMYSILEDGYTMFRPELEFAKLISG 148
            |:.... :.|.|.. .|..:|...|...:.:||:.|.| ..||         ..|    |..::|
 Frog   142 ILRFRFDEAGPESAKKVCLALAHYSQPTDLQLLFAFEYVAQMY---------HNP----ADKVNG 193

  Fly   149 VGMGGASSPNVANITICMPSTSTSTLTVGAGIPHPLQNGYA---IEALACGVGGVGGGALQSPQA 210
            :..||..        .|..:              ||...|:   .|....|              
 Frog   194 IDPGGGD--------FCQRT--------------PLFETYSDWDREIKRTG-------------- 222

  Fly   211 SCEWRITNVNRDFSVCATYGATLIVPKAITDEQI-VLSAAFRDGGRFPVLSYRHENGATLMRSSQ 274
            :.:||:.:||..:.:........:||.::.|:.: ..|.|| .|.|.|:..:.|.||:.|:|.: 
 Frog   223 ASDWRVCSVNEGYMISTCLPEYFVVPSSLADQDLKQYSHAF-VGRRMPLWCWNHSNGSALVRMA- 285

  Fly   275 PLSIQGIKRCR-ADEAILNLVLGRSRKGFIVDTWGKGKSNT-ETDLHYSQWKKVNRSIGNVSSPA 337
              ||:.:.:.| .|:.:.:   |.:|...:       :|:. :.||.:           ||....
 Frog   286 --SIKDLLQLRKIDQRVCS---GITRSHPL-------RSDVYKCDLDH-----------NVPGIQ 327

  Fly   338 SILDSFARLIEAC-NDLGCST-DKWLSRLENSGWLSLVLNSLNASCVVAQCLDQEGSPVLVHGAK 400
            .|..:|::|.:.| |:....| :||||.|||:.||..|...|..:..:...||.....|::...:
 Frog   328 DIHVAFSKLRQLCVNEPFDETEEKWLSSLENTRWLEFVRTFLKQAAELVYMLDFSRRSVVLQEEE 392

  Fly   401 GLDSTLIVTSLVQIILNPDCRTVRGLQALIEREWIQAGHPFASRHRYSCYTPNQTRNKTSGATFV 465
            |.|.:.:|.||||::|:|..||:.|.|:||::||:.:.:||..|..:      ..|::.....||
 Frog   393 GRDVSCLVASLVQLMLDPYFRTIVGFQSLIQKEWVMSAYPFLDRCNH------LKRSEKESPLFV 451

  Fly   466 LFLDCIYQLYTQFPCSFEFSTQLLILLFEHSHFSQYGTFLCDSERERNELNVH------------ 518
            |||||::||..|:|.:|:|:...|.:|.:.:..|.:||||.:|..:|.:.:..            
 Frog   452 LFLDCVWQLLQQYPAAFQFTETYLTVLHDSTRNSLFGTFLFNSPHQRVQQSTEFAIGKNIQLGEE 516

  Fly   519 --TRTTSLWS-----------------YLN----------------------------------- 529
              .:..|:|.                 |:.                                   
 Frog   517 KGLKFPSVWDWSLQFSAKDRALFNNPLYIGKSVPCVQNGAVKSFKRTKKNYSSTMRGMPPSLKNG 581

  Fly   530 ------------------RPDVLQ-----------TFLNPLYEPNAN---VIWPSVAPISLELWS 562
                              :|::||           .:|...:...|:   ||.|.:....:::|.
 Frog   582 LVIQQEIMPRRNSLILKLKPEILQQVPVMPSNGFEQYLRDWFSKPADLHGVILPCLHGTHIKIWK 646

  Fly   563 DLYLRWVID------------QRSSVTVMSQIQELVTREKELR 593
            ..||||..:            ||.|: :.|:|:.|.:|.::.|
 Frog   647 LCYLRWTPEAQINHGGFIMAFQRISI-LASEIELLQSRLRQYR 688

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5026NP_001163392.1 PH-GRAM_MTMR9 1..106 CDD:275398 30/150 (20%)
Myotub-related 117..511 CDD:284109 107/402 (27%)
mtmr10NP_001123828.1 PH-GRAM_MTMR10 20..196 CDD:270154 41/196 (21%)
Myotub-related 174..494 CDD:284109 106/399 (27%)
3-PAP 565..693 CDD:289355 21/125 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.