DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5026 and mtmr4

DIOPT Version :9

Sequence 1:NP_001163392.1 Gene:CG5026 / 39026 FlyBaseID:FBgn0035945 Length:620 Species:Drosophila melanogaster
Sequence 2:XP_004911826.1 Gene:mtmr4 / 100151726 XenbaseID:XB-GENE-986315 Length:1093 Species:Xenopus tropicalis


Alignment Length:566 Identity:157/566 - (27%)
Similarity:244/566 - (43%) Gaps:126/566 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 IDCVEKKPSLSQNIVVGGIITLKCKDLRIISLEIKCGKEFFNVAASLEALSAIQNTELLYPFFYR 123
            |:.||.:......|:        |||.::    ::|  .|.......|.|..:....|      |
 Frog    90 IEAVESRDMFQLQII--------CKDSKV----VRC--HFSTFKQCQEWLKRLSRATL------R 134

  Fly   124 PMYSILEDGYTMFRPELEFAKLISGVGMGGASSPNVANITICMPSTSTSTLTVGAGIPHPLQNGY 188
            |.           :.|..||........|..:......|.:|.|...             :::.:
 Frog   135 PA-----------KQEDLFAFAYHAWCQGICTDEEEPLIHLCRPGDH-------------VKSRF 175

  Fly   189 AIEALACGVGGVGGGALQSPQASCEWRITNVNRDFSVCATYGATLIVPKAITDEQIVLSAAFRDG 253
            .:|.:..|..      ||:     .||::.:|.::.:|.:|...|:||..|||:::...|:||..
 Frog   176 QMELVRMGFD------LQN-----AWRVSEINNNYKLCPSYPQKLLVPVWITDKELENVASFRSW 229

  Fly   254 GRFPVLSYRH-ENGATLMRSSQP-LSIQG-------------IKRCRADEAILNLVLGRSRKGFI 303
            .|.||:.||| ..||.:.|.||| :|..|             .|.|..:.|:      |...|..
 Frog   230 KRIPVVVYRHTRTGAVIARCSQPEISWWGWRNADDEYLVTSIAKACALNPAV------RMPNGNA 288

  Fly   304 VDTWGK-GKSNTETDLHYSQW----------KKV-------------NRSIG------------- 331
            .....| |..|::||...|..          :|:             ||:.|             
 Frog   289 SSKENKDGSDNSDTDFDSSLTACPVEGGGVPQKLLIVDARSYTAAVANRAKGGGCECEEYYPNCE 353

  Fly   332 ----NVSSPASILDSFARLIEACNDLGCSTDKWLSRLENSGWLSLVLNSLNASCVVAQCLDQEGS 392
                .:::..||.:||..|...||.:. ....|||.||::.||..:...|.|:.|||..:|:|..
 Frog   354 VAFMGMANIHSIRNSFQYLRAVCNQVP-DPGNWLSALESTKWLQHLSAMLKAATVVANAVDREER 417

  Fly   393 PVLVHGAKGLDSTLIVTSLVQIILNPDCRTVRGLQALIEREWIQAGHPFASRHRYSCYTPNQTRN 457
            |||||.:.|.|.|..:.||.:::|:|..||:.|.|.|:|.:|:..||.||.|    |.....|.:
 Frog   418 PVLVHCSDGWDRTPQIVSLAKLLLDPYYRTLEGFQVLVETDWLDYGHKFADR----CGHQENTED 478

  Fly   458 KTSGA-TFVLFLDCIYQLYTQFPCSFEFSTQLLILLFEHSHFSQYGTFLCDSERERNELNVHTRT 521
            :.... .|:.:||||:||..||||.|||:...|:.|.:|::...|||||.::..||...|::.||
 Frog   479 QNEQCPVFLQWLDCIHQLLLQFPCHFEFNHAFLVKLVQHTYSCLYGTFLANNLCEREMRNIYKRT 543

  Fly   522 TSLWSYLNRPDVLQTFLNPLYEPNANVIWPSVAPI-SLELWSDLYL 566
            .|:||.|...:  :.|.|.||.|.::::...|..: :|:||:.:||
 Frog   544 CSVWSLLRTGN--KNFHNLLYMPGSDLVLHPVCHVRALQLWTAVYL 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5026NP_001163392.1 PH-GRAM_MTMR9 1..106 CDD:275398 9/46 (20%)
Myotub-related 117..511 CDD:284109 125/450 (28%)
mtmr4XP_004911826.1 PH-GRAM_MTMR4 37..150 CDD:270150 17/90 (19%)
PTP-MTMR4 188..495 CDD:350435 95/322 (30%)
FYVE_MTMR4 1009..1068 CDD:277272
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D824298at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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