DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5653 and Kdm1a

DIOPT Version :10

Sequence 1:NP_648269.1 Gene:CG5653 / 39024 FlyBaseID:FBgn0035943 Length:476 Species:Drosophila melanogaster
Sequence 2:XP_006539392.1 Gene:Kdm1a / 99982 MGIID:1196256 Length:877 Species:Mus musculus


Alignment Length:610 Identity:155/610 - (25%)
Similarity:229/610 - (37%) Gaps:197/610 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 RASSRIIIIGAGVSGIAAATRLLQNNFQNVQILEAEDRIGGRINTVYFGDNVIDLGAQWCHG--- 66
            :.:.::||||:||||:||| |.||:...:|.:|||.||:|||:.|...|:.|.||||....|   
Mouse   297 KKTGKVIIIGSGVSGLAAA-RQLQSFGMDVTLLEARDRVGGRVATFRKGNYVADLGAMVVTGLGG 360

  Fly    67 -------KQQNCVYDMVKDMGILHETGDYYSPIKRVRSNKEVV--------------PHELACRI 110
                   ||.|.....:|....|:|.......:|..:...|:|              .|:|...:
Mouse   361 NPMAVVSKQVNMELAKIKQKCPLYEANGQADTVKVPKEKDEMVEQEFNRLLEATSYLSHQLDFNV 425

  Fly   111 HDIAVKSMPSGPHPVVGSFGTHLTQ---TFWRKI---ESELPQVNRDVASEALNTFAKHESSIIG 169
            .:....|:......|:.....|:..   ..|:||   :.||        .|.||...        
Mouse   426 LNNKPVSLGQALEVVIQLQEKHVKDEQIEHWKKIVKTQEEL--------KELLNKMV-------- 474

  Fly   170 ADNLFEVSVREHIEYHECD-----GDKLLHWGTKGYRRFLRLLMKVSADTPEELGLLEGRIQ--- 226
              ||.|.....|.:|.|..     .|....:..|...|.|..|.|...:..|..|.||.::|   
Mouse   475 --NLKEKIKELHQQYKEASEVKPPRDITAEFLVKSKHRDLTALCKEYDELAETQGKLEEKLQELE 537

  Fly   227 ----------------LDMKVIKIEL--ACPRKVI-LR--CQDGDY------------------- 251
                            ||.....:|.  |.|...: |:  .||.|:                   
Mouse   538 ANPPSDVYLSSRDRQILDWHFANLEFANATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVA 602

  Fly   252 --------------------------------------FEADHVICTVSLGVLQEQHEKL-FVPP 277
                                                  ::.|.|:||:.||||::|...: ||||
Mouse   603 LAEGLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPP 667

  Fly   278 LPAAKVNAIRSLTLGTVNKLYLEYEK---QPLPD--GWVG--------FFCFWLEEDLIELRKTE 329
            ||..|.:|::.:..|.:||:.|.:::   .|..:  |.||        .|.||      .|.|..
Mouse   668 LPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFW------NLYKAP 726

  Fly   330 YFWVEGITGVHMITCQPRMLMAWVNGPHGRHMETLSDE-------KVLEGLYWLFRKFLTFEIPP 387
                              :|:|.|.|.....||.:||:       .:|:|:      |.:..:|.
Mouse   727 ------------------ILLALVAGEAAGIMENISDDVIVGRCLAILKGI------FGSSAVPQ 767

  Fly   388 PKRFVRSSWFSNPNFRGSWSYRGVMADERNTGPWDL-ESPVLGEDGHLG-------LLFAGEASS 444
            ||..|.|.|.::|..|||:||   :|...:...:|| ..|:.......|       |.||||.:.
Mouse   768 PKETVVSRWRADPWARGSYSY---VAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRLFFAGEHTI 829

  Fly   445 RNHFSTVHGAVEAGYREADRLIDHY 469
            ||:.:|||||:.:|.|||.|:.|.:
Mouse   830 RNYPATVHGALLSGLREAGRIADQF 854

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5653NP_648269.1 Amino_oxidase 17..466 CDD:396255 149/593 (25%)
Kdm1aXP_006539392.1 PHA03378 <39..>99 CDD:223065
PLN02328 204..850 CDD:215187 153/604 (25%)
Blue background indicates that the domain is not in the aligned region.

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