DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5653 and FMS1

DIOPT Version :9

Sequence 1:NP_648269.1 Gene:CG5653 / 39024 FlyBaseID:FBgn0035943 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_013733.1 Gene:FMS1 / 855034 SGDID:S000004622 Length:508 Species:Saccharomyces cerevisiae


Alignment Length:564 Identity:130/564 - (23%)
Similarity:217/564 - (38%) Gaps:167/564 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ASSRIIIIGAGVSGIAAATRLLQNNFQNVQILEAEDRIGGRINTV--YFGDNVIDLGAQWCHGKQ 68
            |..::||||||::|:.||:.|.||..|:..:|||.||:|||:.||  |.| ...|:||.|.|...
Yeast     7 AKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQTVTGYQG-RKYDIGASWHHDTL 70

  Fly    69 QN-----------------CVYDMVKDMGILHETGDYYSPIKRVRSNK----EVVPHELACRIHD 112
            .|                 .|:|....:.|..|.|       ||..:|    |:|.:|:: :..:
Yeast    71 TNPLFLEEAQLSLNDGRTRFVFDDDNFIYIDEERG-------RVDHDKELLLEIVDNEMS-KFAE 127

  Fly   113 IAVKSMPSGPHPVVGSFGTHL---TQTFWRKIESELPQVNRDVASEALNTFAKHESSIIGADNLF 174
            :              .|..||   ..:|::.:...|.|..:.:.::.:.               :
Yeast   128 L--------------EFHQHLGVSDCSFFQLVMKYLLQRRQFLTNDQIR---------------Y 163

  Fly   175 EVSVREHIE-YHECDGDKLL-----HWGTKGYRRFL----RLLMKVSADTPEELGLLEGRIQLDM 229
            ...:..::| :|..|. |||     ::|.:|...|.    .::.:::...|:..      ::|..
Yeast   164 LPQLCRYLELWHGLDW-KLLSAKDTYFGHQGRNAFALNYDSVVQRIAQSFPQNW------LKLSC 221

  Fly   230 KVIKIELACPRKVILRCQDGDYFEADHVICTVSLGV--LQEQHEK------LFVPPLPAAKVNAI 286
            :|..|.....:.|.:.|:||..:.||:||.||...|  |..|.||      .|.|||.....:|.
Yeast   222 EVKSITREPSKNVTVNCEDGTVYNADYVIITVPQSVLNLSVQPEKNLRGRIEFQPPLKPVIQDAF 286

  Fly   287 RSLTLGTVNKLYLEYEKQPLPDGWVGFFCFWLEED--LIELRKTEYFWVEGITGVH--------- 340
            ..:..|.:.|:..|:|:           |.|..|.  ::.|..:...:||.:....         
Yeast   287 DKIHFGALGKVIFEFEE-----------CCWSNESSKIVTLANSTNEFVEIVRNAENLDELDSML 340

  Fly   341 ---------MITC--QP------------RMLMAWVNGPHGRHMETLSDEKVLEGLYWLFRKFL- 381
                     .:||  ||            ...|..:..|...|:|::.::|  |.|:..|:..| 
Yeast   341 EREDSQKHTSVTCWSQPLFFVNLSKSTGVASFMMLMQAPLTNHIESIREDK--ERLFSFFQPVLN 403

  Fly   382 ----------------------TFEIPPPKRFVRSSWFSNPNFRGSWSYRGVMADERNTGPWDLE 424
                                  ....|..:..:.|:|..:|..||::|     |......|.|:.
Yeast   404 KIMKCLDSEDVIDGMRPIENIANANKPVLRNIIVSNWTRDPYSRGAYS-----ACFPGDDPVDMV 463

  Fly   425 SPVL-GEDGHLGLLFAGEASSRNHFSTVHGAVEAGYREADRLID 467
            ..:. |:|..  :.||||.:..:.....:||.|:|.|||.|:.|
Yeast   464 VAMSNGQDSR--IRFAGEHTIMDGAGCAYGAWESGRREATRISD 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5653NP_648269.1 NAD_binding_8 12..78 CDD:290186 32/84 (38%)
Amino_oxidase 17..466 CDD:279874 122/550 (22%)
FMS1NP_013733.1 Amino_oxidase 18..503 CDD:396255 121/549 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000632
OrthoInspector 1 1.000 - - otm46708
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.870

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