DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5653 and Kdm1b

DIOPT Version :10

Sequence 1:NP_648269.1 Gene:CG5653 / 39024 FlyBaseID:FBgn0035943 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_001100813.1 Gene:Kdm1b / 306819 RGDID:1310701 Length:824 Species:Rattus norvegicus


Alignment Length:496 Identity:127/496 - (25%)
Similarity:213/496 - (42%) Gaps:103/496 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 IIIIGAGVSGIAAATRLLQNNFQNVQILEAEDRIGGRI-NTVYFGDNVIDLGAQWCHGKQQNCVY 73
            ::::|||.:|:||| |.|.|....|.:|||:||||||: :...|...|:..|.|..:|...|.|.
  Rat   389 VLVVGAGPAGLAAA-RQLHNFGMKVTVLEAKDRIGGRVWDDKSFKGVVVGRGPQIVNGCINNPVA 452

  Fly    74 DMVKDMGI-LHETGDYYSPIKRVRSNKEVVPHELACRIHDIAV-KSMPSGPHPVVGSFGTHL-TQ 135
            .|.:.:|| :|:.|:....|:.            ..||.|..: |.|..       .|...| ..
  Rat   453 LMCEQLGIRMHKLGERCDLIQE------------GGRITDPTIDKRMDF-------HFNALLDVV 498

  Fly   136 TFWRK---------IESELPQVNRDVASEALNTFAKHESSIIG----------ADNLFEVSVR-- 179
            :.|||         :..::.::.|....|:...|::.|..::.          ..:|.:||.|  
  Rat   499 SEWRKDKTLLQDVPLGEKIEEIYRAFVKESGIQFSELEGQVLQFHLSNLEYACGSSLHQVSARSW 563

  Fly   180 EHIEYH-ECDGDKLLHWGTKGYRRFLRLLMKVSADTPEELGLLEGRIQLDMKVIKIELACPRKVI 243
            :|.|:. :..||..|.  |.||...:..|.:         ||   .|:|...|..|:.. ..:|.
  Rat   564 DHNEFFAQFAGDHTLL--TPGYSTIVEKLAE---------GL---DIRLKSPVQSIDYT-GDEVQ 613

  Fly   244 LRCQDGDYFEADHVICTVSLGVLQEQHEKLFVPPLPAAKVNAIRSLTLGTVNKLYLEYEKQPLPD 308
            :...||....|..|:.||.|.:||....: |.|||...|:.||.||..|.:.|:.|::.      
  Rat   614 VTTTDGVVHSAQKVLVTVPLAMLQRGAIQ-FNPPLSEKKMKAINSLGAGIIEKIALQFP------ 671

  Fly   309 GWVGFFCFWLEEDLIELRKTEYFW-------VEGITGV-HMITCQPRMLMAWVNGPHGRHMETLS 365
                 :.||..    :::..::|.       ..|:..| :.:..|..:||:.:.|.....:.|:.
  Rat   672 -----YRFWDS----KVQGADFFGHVPPSASQRGLFAVFYDMGPQQSVLMSVITGEAVASLRTMD 727

  Fly   366 DEKVLEGLYWLFRK-FLTFEIPPPKRFVRSSWFSNPNFRGSWSY-----RGVMADERNTGPWDLE 424
            |::||:....:.|: |...|||.|.::..:.|.:.|..:.::|:     .|...|          
  Rat   728 DKQVLQQCLGVLRELFKEQEIPDPTKYFVTRWNTEPWIQMAYSFVKTFGSGEAYD---------- 782

  Fly   425 SPVLGEDGHLGLLFAGEASSRNHFSTVHGAVEAGYREADRL 465
              ::.|:....:.|||||::|:...||.||..:|.|||.::
  Rat   783 --IIAEEIQGTVYFAGEATNRHFPQTVTGAYLSGVREASKI 821

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5653NP_648269.1 Amino_oxidase 17..466 CDD:396255 124/489 (25%)
Kdm1bNP_001100813.1 zf-CW 138..191 CDD:462181
PLN02328 <306..821 CDD:215187 127/494 (26%)
Blue background indicates that the domain is not in the aligned region.

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