DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5653 and Lao1

DIOPT Version :9

Sequence 1:NP_648269.1 Gene:CG5653 / 39024 FlyBaseID:FBgn0035943 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_001100152.1 Gene:Lao1 / 298483 RGDID:1310787 Length:519 Species:Rattus norvegicus


Alignment Length:533 Identity:114/533 - (21%)
Similarity:202/533 - (37%) Gaps:153/533 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ASSRIIIIGAGVSGIAAATRLLQNNFQNVQILEAEDRIGGRINTV-------YFGDNVIDLGAQW 63
            :|.||:::|||::|:.|| :|||:....|.||||.:.||||:.|:       :|     :||...
  Rat    56 SSKRIVVVGAGMAGLVAA-KLLQDAGHEVTILEASNHIGGRVVTLRNKEEGWHF-----ELGPMR 114

  Fly    64 CHGKQQNCVYDMVKDMGI------LHETGDYY------SPIKRVRSNKEVV-----PHELACRIH 111
            . .:....::..::..|:      .|:...:|      .....|::|.|::     |.|......
  Rat   115 I-PESHRIIHTYIQKFGLKLNNFTQHDNNTWYLLRGHRYRASEVKANPEILGYPLRPSEKNKTAE 178

  Fly   112 DI----AVKSMPSGPHPVVGSFGTHLTQTFWRKIESELPQVNRDVASEALNTFAKHESSIIGADN 172
            |:    ..|...|....::..:.::.|:.:..| |..|.:...::..:.:|..|....|::.:..
  Rat   179 DLFYQAITKVKASNCSQLLSLYDSYSTKAYLLK-EGMLSRGAVEMIGDMMNENAGFYRSLLESLR 242

  Fly   173 LFEVSVREHIEYHECDG--DKLLHWGTKGYRRFLRLLMKVSADTPEEL--GLLEGRIQLDMKVIK 233
            :..:..:.. ::.|..|  |:|                      |..|  .|..|.|.|..||.:
  Rat   243 IANIFTKND-QFTEITGGFDQL----------------------PNSLNDSLKPGTIHLGSKVER 284

  Fly   234 IELACPRKVILRCQDGD-----YFEADHVICTVSLGVLQEQHEKL--FVPPLPAAKVNAIRSLTL 291
            :.....:..:|...||.     ...||:||.:.|     .:..:|  |.|||...|:.|:||:..
  Rat   285 VVGNESKVEVLYRTDGPTSALYNLTADYVIISAS-----AKATRLIAFQPPLSPEKIRALRSVHY 344

  Fly   292 GTVNKLYLEYEKQPLPDGWVGFFCFWLEEDLIELRKTEYFW-VEGITGVHMITCQPRMLMAW--V 353
            .:..|              |.|.|            .|.|| .:||.|.:.||.:|...:.:  .
  Rat   345 NSATK--------------VIFVC------------NERFWEKDGIHGGYSITDRPSRFIYYPSY 383

  Fly   354 NGPHGRHM----ETLSDEK--------------VLEGLYWLFRKFLTFEIPP-------PKRFVR 393
            :.|..:.:    .|:.|:.              :|:.|      .....||.       ||..|:
  Rat   384 SRPSSKGILLASFTMDDDSFFFTALKPNQVVDIILDDL------AAVHLIPKEELKRMCPKSEVK 442

  Fly   394 SSWFSNPNFRGSWSYRGVMADERNTGPW----DLESPVLGEDGHLGLLFAGEASSRNHFSTVHGA 454
             .|..:|...||::         ...|:    ||:. :...:|.  :.||||.:|..| :.:..|
  Rat   443 -HWSLDPFTIGSYA---------EFTPYQFLDDLKQ-LSQTEGR--IYFAGEHTSLPH-AWIETA 493

  Fly   455 VEAGYREADRLID 467
            :::|.|.|..:.|
  Rat   494 IKSGIRAAKNIQD 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5653NP_648269.1 NAD_binding_8 12..78 CDD:290186 22/72 (31%)
Amino_oxidase 17..466 CDD:279874 107/519 (21%)
Lao1NP_001100152.1 NAD_binding_8 62..>125 CDD:290186 22/69 (32%)
Amino_oxidase 67..504 CDD:279874 107/518 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166343400
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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