DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5653 and amx-3

DIOPT Version :9

Sequence 1:NP_648269.1 Gene:CG5653 / 39024 FlyBaseID:FBgn0035943 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_001355373.1 Gene:amx-3 / 184919 WormBaseID:WBGene00000139 Length:450 Species:Caenorhabditis elegans


Alignment Length:502 Identity:121/502 - (24%)
Similarity:212/502 - (42%) Gaps:100/502 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 RIIIIGAGVSGIAAATRLLQNNFQNV----QILEAEDRIGGRINTVYFGDNVIDLGAQWCHGKQQ 69
            ::.|||||::|:.:|.     :|:.|    .|.|..:|||||:....:.|..:..||::.:| ..
 Worm     3 KVCIIGAGLAGLRSAI-----HFEQVGIDYTIFEGSNRIGGRVYPFEYQDGYLHFGAEYVNG-VD 61

  Fly    70 NCVYDMVKDMGILHETG---------DYYSPIKRVRSNKEVVPHELACRIHD------IAV--KS 117
            |.||::|:...:..:|.         |..:.|..|  |..:||.::..:.:|      :|:  ||
 Worm    62 NEVYNLVEKYDLFDKTKPRTDDLWMLDQDNSITLV--NGHLVPKKILDKFNDYIRYLNVALYEKS 124

  Fly   118 MPSGPHPVVGSFGTHLTQTFWRKIESELPQVNRDVASEALNTFAKHESSIIGADNLFEVSVREHI 182
            :......|.........: |.|.:.....::...:.:...|.|....||.:|..:|..:|:.:  
 Worm   125 IKINQLSVENEINNQFIE-FLRDVPENDHEIYESLINVYKNYFQTEWSSPVGELSLSNLSIWD-- 186

  Fly   183 EYHECDGDKLLHWGTKGYRRFLRLLMKVSADTPEELGLLEGRIQLDMKVIKIELACPRKVILRCQ 247
                 ||.:.........:.|..:|....:..|      .|.|:|:.:||.::.  ...:::..:
 Worm   187 -----DGTEEEDSAVLNKQGFYEILKDFRSKIP------AGNIRLNCEVINVKE--EENIMVTLK 238

  Fly   248 DGDYFEADHVICTVSLGVLQEQHEKLFVPPLPAAKVNAIRSLTLGTVNKLYLEYEKQPLPDGWVG 312
            :|:....|..|.|.|||.|::.|:.||.|.|.:.|.:||..:..|...|::|||.     |.|  
 Worm   239 NGEVLHFDACIVTCSLGYLKKHHKTLFTPQLTSVKQDAINRMGFGNNLKVFLEYS-----DSW-- 296

  Fly   313 FFCFW------------LEEDLIELRKTEYFWVEGITGVHMITCQPRMLMAWV--NGPHGRHMET 363
                |            ..||.:..:.:.  |.|.|            |:.|:  :||.....:|
 Worm   297 ----WNSLNTILILTHGENEDFMVFQPSS--WAENI------------LLCWIAGSGPKKICDKT 343

  Fly   364 LSDEKVL--EGLYWLFRKFLTFEIPPPKRFVRSSWFSNPNFRGSWSY--RGVMADERNTGPWD-- 422
            ..:.|:|  ..|:...:.:|  ::....:..|.:|.::....||:||  .|.:..|      |  
 Worm   344 DFELKILLDTHLHDQLKNYL--DVKASVKIYRKNWINDEFTLGSYSYLTPGQIVGE------DIC 400

  Fly   423 -LESPVLGEDGHLGLLFAGEASSRNHFSTVHGAVEAGYREADRLIDH 468
             |..||| :|.:..:.||||.:....:.|..|||.:|.|||.|:.:|
 Worm   401 ILAQPVL-KDNNPVICFAGEHTDSTMYQTTVGAVRSGLREASRISEH 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5653NP_648269.1 NAD_binding_8 12..78 CDD:290186 24/69 (35%)
Amino_oxidase 17..466 CDD:279874 115/490 (23%)
amx-3NP_001355373.1 Amino_oxidase 11..443 CDD:366721 114/489 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D375579at33208
OrthoFinder 1 1.000 - - FOG0000632
OrthoInspector 1 1.000 - - mtm4748
orthoMCL 1 0.900 - - OOG6_102123
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X429
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.820

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