DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5653 and amx-1

DIOPT Version :10

Sequence 1:NP_648269.1 Gene:CG5653 / 39024 FlyBaseID:FBgn0035943 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_497772.2 Gene:amx-1 / 175493 WormBaseID:WBGene00000137 Length:824 Species:Caenorhabditis elegans


Alignment Length:540 Identity:124/540 - (22%)
Similarity:199/540 - (36%) Gaps:161/540 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 RIIIIGAGVSGIAAATRLLQNNFQNVQILEAEDRIGGRINTVYFGDNVIDL----GAQWCHGKQQ 69
            :|.|||||:|||:.|..|.......| :.||:||.|||:    ..|..:.:    |||...|...
 Worm   353 KIAIIGAGISGISTARHLKHLGIDAV-LFEAKDRFGGRM----MDDQSLGVSVGKGAQIIVGNIN 412

  Fly    70 NCVYDMVKDMGILHETGDYYSP----------IKRVRSNKEVVPHELACRIHDIAVKSMPSGPHP 124
            |.:..:.:.:||.:...:::.|          ::|...:.:|..|.                   
 Worm   413 NPITLLCEQIGIKYRNSNFFCPLIDENGRCFTLERKELDDQVDLHY------------------- 458

  Fly   125 VVGSFGTHLTQTFWRKIESE--LPQVNRDVAS--EALNTFAKHESSIIGA---DNLFEVSVREHI 182
                  .::......|.:|:  .|.|..:|.:  .....|:|..|.::.|   |:|:.....:.:
 Worm   459 ------NNVLDAIRNKYQSDRNFPDVPLEVTNFRHFTEMFSKMSSGLLSAADLDSLYTPEFEKLL 517

  Fly   183 EYH------ECDGDKLLHWGTKGYRRFLRLLMKVSADTPEELGLLEGR-----------IQLDMK 230
            ::|      .| |..:.:...|.|            |..|:.|...|.           |.....
 Worm   518 DFHLGNLEFSC-GTHVSNLSAKDY------------DHNEKFGNFAGEHAVITDGAQRIIDFLAT 569

  Fly   231 VIKIELACP----------RKVILRCQDGDYF--EADHVICTVSLGVLQEQHEKLFVPPLPAAKV 283
            .:.|.|.||          |||.:..::.:..  |.|.|:.|.||.||:..|.|:||||||..|.
 Worm   570 GLDIRLNCPVKCIDWGRDDRKVKIFFENAEQAAEEFDKVVITTSLSVLKSNHSKMFVPPLPIEKQ 634

  Fly   284 NAIRSLTLGTVNKLYLEYEKQPLPDGWVGFFCFWLEEDLIELRKTEYFWVEGITGVHMITCQ--- 345
            .||..|..|.:.|:.::::::           ||...|...|| ||||.       .:..|:   
 Worm   635 KAIDDLGAGLIEKIAVKFDRR-----------FWDTVDADGLR-TEYFG-------KVSDCKTDR 680

  Fly   346 -------------PR-----MLMAWVNGPHGRHMETLSDEKVLEGLYWLFRKFLTFEIPPPKRFV 392
                         |.     :||::|...|...:..|::.:|.:......||.....:..|...:
 Worm   681 SLFNIFYDFSGKDPNGEDTFVLMSYVTAEHVNLVNVLTESEVADKFCATLRKMFPSAVINPLGHM 745

  Fly   393 RSSWFSNPNFRGSWSYRGVMADERNTGPWDLESPVLGEDGHL-----------GLLFAGEASSRN 446
            .|.|.:: .|.| .||..|        |:       |.||..           .|.||||.:...
 Worm   746 MSHWGAD-RFVG-MSYTFV--------PF-------GSDGDATYNQLKKSIDEKLYFAGEHTIAA 793

  Fly   447 HFSTVHGAVEAGYREADRLI 466
            ...|:.||..:|.|||.:::
 Worm   794 EPQTMAGAYISGLREAGQIV 813

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5653NP_648269.1 Amino_oxidase 17..466 CDD:396255 118/530 (22%)
amx-1NP_497772.2 SWIRM 254..337 CDD:461307
Amino_oxidase 361..812 CDD:396255 118/529 (22%)
Blue background indicates that the domain is not in the aligned region.

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