DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5653 and Su(var)3-3

DIOPT Version :10

Sequence 1:NP_648269.1 Gene:CG5653 / 39024 FlyBaseID:FBgn0035943 Length:476 Species:Drosophila melanogaster
Sequence 2:XP_061518943.1 Gene:Su(var)3-3 / 1280978 VectorBaseID:AGAMI1_011244 Length:886 Species:Anopheles gambiae


Alignment Length:697 Identity:155/697 - (22%)
Similarity:241/697 - (34%) Gaps:304/697 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SRIIIIGAGVSGIAAATRLLQNNFQNVQILEAEDRIGGRINTVYFGDNVIDLGAQ-----W---- 63
            :::|:||||:||:|||.:|.|..| :|.:|||.||:||||.|........||||.     |    
Mosquito   241 AKVIVIGAGISGLAAAQQLQQFGF-DVIVLEARDRVGGRIATFRKNAYTADLGAMVVTGTWGNPL 304

  Fly    64 -----------CHGKQQNCVY------------DMV-KDMGILHETGDYYS-----------PI- 92
                       |..|....:|            ||| ::...|.|...|.|           |: 
Mosquito   305 TILSKQTGMEMCPIKSVCPLYGAGGKPVPKHKDDMVEREFNRLLEATSYLSHQLDFNYAGNHPVS 369

  Fly    93 -------------------------------KRVRSNKEVVPHELACRIHDIAVKSM-------P 119
                                           :::.:|::.:...|| ||.|:..|..       |
Mosquito   370 LGQALEWIIKLQEKHVKEKQVQHLGGIIGCQQKLLANQQQLVETLA-RIRDLKAKQQHLIDTKPP 433

  Fly   120 SGPHPVV-------GSFGT--------------------------HLTQTFWRKIE------SEL 145
            ..|.|..       |..||                          ...|..|:::|      :||
Mosquito   434 KPPPPAKEGGSGGGGGGGTAGQDTSGGDSAGTKYFEHEFQLRVMAREEQLAWKEVERLQAYQTEL 498

  Fly   146 PQVNRDVASEALNTFAKHESSIIGADNLFEVSVREHIEYHECDGD----------KLLHWGTKGY 200
            ....|::.:|.::     |..:...|       |:.:::|..:.:          .|.||.....
Mosquito   499 EAKVRELENEQVS-----EVYLSSKD-------RQILDWHFANLEFANATPLSNLSLKHWDQDDD 551

  Fly   201 RRFLRLLMKVSADTPEELG-------LLEGRIQLDMKVIKIELACPRKVILRCQDGDY------- 251
            ..|      :.:.|..:.|       |.|   .||::| ...:.|     :|.:.|..       
Mosquito   552 FEF------IGSHTTVKNGYSCVPIALTE---NLDVRV-NTAVTC-----IRYRPGGVEVTADLK 601

  Fly   252 -------FEADHVICTVSLGVLQ----EQHEKL----FVPPLPAAKVNAIRSLTLGTVNKLYLEY 301
                   :.||.|:||::||:|:    ::.::|    |.|.||..|..|||.|..|.:||:.|.:
Mosquito   602 SNNSTVCYRADLVLCTLTLGILKLAIAKESKQLNTVRFDPELPEWKQLAIRRLGFGNLNKVVLCF 666

  Fly   302 EK---QPLPD--GWVG--------FFCFWLEEDLIELRKTEYFWVEGITGVHMITCQPRMLMAWV 353
            ::   .|..:  |.||        .|.||                 .|:       |..:|:|.|
Mosquito   667 DRIFWDPNTNLFGHVGSTTASRGELFLFW-----------------NIS-------QSPVLLALV 707

  Fly   354 NGPHGRHMETLSDE-------KVLEGLYWLFRKFLTFEIPPPKRFVRSSWFSNPNFRGSWSYRGV 411
            .|.....||.:||:       .||:|:      |....:|.||..|.:.|.::|..|||:|:..|
Mosquito   708 AGQSAAIMENVSDDVIVGRCIAVLKGI------FGNSAVPQPKETVVTRWRADPWARGSYSFVSV 766

  Fly   412 MA------------------------------------------------------DERNTGPWD 422
            .|                                                      |:.::.|.|
Mosquito   767 GASGSDYDLLAAPVTPKAPEGAKPPPPPQKPPTAPQQQQQQQRHDKNGDKKDNEENDDEDSNPID 831

  Fly   423 LESPVLGEDGHLGLLFAGEASSRNHFSTVHGAVEAGYREADRLIDHY 469
            :..          |.||||.:.||:.:|||||:.:|.|||.|:.|:|
Mosquito   832 IPR----------LFFAGEHTIRNYPATVHGALLSGLREAGRIADYY 868

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5653NP_648269.1 Amino_oxidase 17..466 CDD:396255 148/683 (22%)
Su(var)3-3XP_061518943.1 None

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