DRSC/TRiP Functional Genomics Resources

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Protein Alignment ValRS-m and AT1G27160

DIOPT Version :10

Sequence 1:NP_648268.1 Gene:ValRS-m / 39023 FlyBaseID:FBgn0035942 Length:994 Species:Drosophila melanogaster
Sequence 2:NP_174036.1 Gene:AT1G27160 / 839605 AraportID:AT1G27160 Length:200 Species:Arabidopsis thaliana


Alignment Length:188 Identity:46/188 - (24%)
Similarity:83/188 - (44%) Gaps:37/188 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   757 FYQY-LCDTYLETTKPAIGNRSADAY--IHV-GTLTACLSWGLQAMAPYAPFVASELLQHVPLN- 816
            ::|| .||.::|..||..   |||..  ||. ..|..||..||:.:.|:.|::..||.|.:|.: 
plant    14 WWQYQFCDVFIEAIKPYF---SADTQRRIHAQDALWVCLETGLRLLHPFMPYITEELWQRLPSSQ 75

  Fly   817 -----IELKLSDY-------KDEKLEEEVNEIVNICHNVRQVKSRNEISKRHHPQLSLFA--QNT 867
                 ..:.:.||       .:||:|.|::.::.....:|.:::...:.::.:.:...||  .|.
plant    76 DSERKASIMICDYPSSIEMWTNEKVETEMDMVLATVKTLRALRAAESLKRQRNEKFHAFALSGNA 140

  Fly   868 DSEGVLRRHLPQIKVLSRCEDVELELFDESSK-----------ISKQLSYFSTAGALC 914
            .:.|:::.|..:|:.|:.....|:.|..|...           ||..:.||    .||
plant   141 LTLGIVKPHELEIRTLANLSSFEVMLRGEDKAFVVCWEEIEIWISYNVLYF----ILC 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ValRS-mNP_648268.1 PTZ00419 23..989 CDD:240411 46/188 (24%)
AT1G27160NP_174036.1 PLN02381 <10..172 CDD:215214 40/160 (25%)

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