DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ValRS-m and EMB2247

DIOPT Version :10

Sequence 1:NP_648268.1 Gene:ValRS-m / 39023 FlyBaseID:FBgn0035942 Length:994 Species:Drosophila melanogaster
Sequence 2:NP_568337.4 Gene:EMB2247 / 831533 AraportID:AT5G16715 Length:974 Species:Arabidopsis thaliana


Alignment Length:948 Identity:319/948 - (33%)
Similarity:485/948 - (51%) Gaps:131/948 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 LPPPNVTGNLHLGHALMATVQDVIARQREQLGYQVDWVPGTDHAGIATQVVVERTIAASQAKTRH 143
            :|||||||:||:|||:..|::|::.|.....|....|:|||||||||||:|||:.:|:...| |.
plant   106 MPPPNVTGSLHMGHAMFVTLEDIMVRYNRMNGRPTLWLPGTDHAGIATQLVVEKMLASEGIK-RV 169

  Fly   144 ELGRSAFLDEVWRWKAEKGAGIVQDLRQLGCKLNWQREYFTMDEQQAHAVNVAFERLFEEGLIQR 208
            :|||..|...||.||.:.|..|...:::||...:|.||.||:|||.:.||..||.:|.::|||.:
plant   170 DLGRDEFTKRVWEWKEKYGGTITNQIKRLGASCDWSRERFTLDEQLSRAVVEAFVKLHDKGLIYQ 234

  Fly   209 RNSVVNWCTALRSAISDIEVDSVEITEPVEISVPGYDHKVLFGRMYDFAYHVVDGEALPDGSVEE 273
            .:.:|||...|::|:||:||:..|  ||              |.:|...|.|.       ||.:.
plant   235 GSYMVNWSPNLQTAVSDLEVEYSE--EP--------------GFLYHIKYRVA-------GSPDF 276

  Fly   274 IVVSTTRPETILGDVAVAVHPLDPRYAKYRNIDQVKLKHPFRDDTIPLVFDITVDQEFGTGAVKI 338
            :.::||||||:.||||:||||.|.||:||  :.|..:........:|::.|..||::||||.:||
plant   277 LTIATTRPETLFGDVALAVHPEDDRYSKY--VGQTAIVPMTYGRHVPIIADKYVDKDFGTGVLKI 339

  Fly   339 TPAHDKFDFELATRHKLEPRQVFTETGLVVDAYSEYKGIPRFEARDLIVNRLEEMDLLRQVRSHT 403
            :|.||..|:.||.:..|....|..:...:.|....:.|:.|||.|:.:...|||:.|..:...||
plant   340 SPGHDHNDYLLARKLGLPILNVMNKDATLNDVAGLFCGLDRFEVREKLWADLEEIGLAVKKEPHT 404

  Fly   404 MQLPICSRSKDVIEYMILPQWFLKCKDLAKDALSELHSGRLQILPPNFETEWERWLQDSRDWCIS 468
            :::|...|..:|||.::..|||:....||:.||..:.:..|.|:|..||..:..||.:.:|||||
plant   405 LRVPRSQRGGEVIEPLVSKQWFVHMDPLAEKALLAVENKELTIIPERFEKIYNHWLTNIKDWCIS 469

  Fly   469 RQLWWGHQVPAYEVIDSQGNSQWVAALDEKTARQKAMRLIGSEEFTLKRDPDVLDTWFSSSLLPF 533
            |||||||::|.:.|:.......::.|...:.|.:||:...| ::..:.:|||||||||||||.||
plant   470 RQLWWGHRIPVWYVVGKDCEEDYIVAKSAEEALEKALEKYG-KDVEIYQDPDVLDTWFSSSLWPF 533

  Fly   534 STAGWPE---ESYKERYPLDIMQTGHDIIFFWVARMMMLGLKLTGEAPFQRILLNGIVCDAHGRK 595
            ||.|||:   :.:...||.::::|||||:|||||||:|:|::.||..||..:.|:|::.|:.|||
plant   534 STLGWPDVAAKDFNNFYPTNMLETGHDILFFWVARMVMMGIEFTGTVPFSHVYLHGLIRDSQGRK 598

  Fly   596 MSKSIGNIVAPQQVVQGASLESLKAGLEQSCEAGIITPSELKASTIGMTQMFPNGIQECGTDALR 660
            ||||:||::.|        |:::|                                 :.||||||
plant   599 MSKSLGNVIDP--------LDTIK---------------------------------DFGTDALR 622

  Fly   661 FTLMSHNIKSHFISFDVNACHTNKLFLNKVWQAMRFTLGSAKGLG----------ISLHQFETLE 715
            ||: :.......::........||.|.||:|.|.:|.|.|...|.          :.|.:.||| 
plant   623 FTI-ALGTAGQDLNLSTERLTANKAFTNKLWNAGKFVLHSLPSLSDTSAWENLLDLKLDKEETL- 685

  Fly   716 GVNLGLWDRWIVGRLAETLSVCSQSYSNYNFHLATAALKTFFYQYLCDTYLETTKPAI----GNR 776
             ::|.|.:.|.|.:|...:...:.||....|.........||:....|.|:|.:|..:    ||.
plant   686 -LSLPLPECWAVSKLHILIDSVTASYEKLFFGDVGRETYDFFWSDFADWYIEASKSRLYGSGGNS 749

  Fly   777 SADA------YIHVGTLTACLSWGLQAMAPYAPFVASELLQHVPLNIE-LKLSDYKDEKLE---E 831
            .:.|      |:....        |:.:.|:.|||..:|.|.:|...| |.:|.:....|.   |
plant   750 VSLASQAVLLYVFENI--------LKLLHPFMPFVTEDLWQALPYRKEALIVSPWPQNSLPRNVE 806

  Fly   832 EVNEIVNICHNVRQVK-SRNEISKRHHPQLSLFAQNTDSEGVLRRHLPQIKVLSRCEDVELELFD 895
            .:....|:....|.:: :|.|.|.  .|...:.|....|..|       |:.:|:    |.|:..
plant   807 SIKRFENLQALTRAIRNARAEYSV--EPVKRISASVVGSAEV-------IEYISK----EKEVLA 858

  Fly   896 ESSKISKQLSYFSTA---GALCSFGLKLSDGLD------LTPEKRDEMQKANAKKLKKLVTELQR 951
            ..|::.....:||.|   .|..|..|..|:||:      ...:...|:|:. :|:|.|:.||...
plant   859 LLSRLDLNNVHFSNAPPGDANLSVHLVASEGLEAYLPLAAMVDISSEVQRI-SKRLSKMQTEYDA 922

  Fly   952 YRMRLDNEAFQLMADKKVKSHFENKVKELEAEINSLTR 989
            ...||.:..|...|.::|....:.:|:|||.:| .||:
plant   923 LITRLSSPKFVEKAPEEVVRGVKEQVEELEEKI-KLTK 959

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ValRS-mNP_648268.1 PTZ00419 23..989 CDD:240411 318/946 (34%)
EMB2247NP_568337.4 PLN02943 7..974 CDD:215509 319/948 (34%)

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