DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ValRS-m and ValRS

DIOPT Version :10

Sequence 1:NP_648268.1 Gene:ValRS-m / 39023 FlyBaseID:FBgn0035942 Length:994 Species:Drosophila melanogaster
Sequence 2:NP_001260946.1 Gene:ValRS / 45783 FlyBaseID:FBgn0027079 Length:1055 Species:Drosophila melanogaster


Alignment Length:1009 Identity:380/1009 - (37%)
Similarity:554/1009 - (54%) Gaps:112/1009 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 KDAANELPLAAGYQPQPVE---NAYWER------EHRQANLPKASASSCKRGTYRMLLPPPNVTG 86
            ||.:..||.|  |.|:.||   .::||:      |:.:|::...:.:    |.:.|::|||||||
  Fly    84 KDLSGALPDA--YSPRYVEAQWYSWWEKEGFFTPEYGRASIDAPNPN----GKFVMIIPPPNVTG 142

  Fly    87 NLHLGHALMATVQDVIARQREQLGYQVDWVPGTDHAGIATQVVVERTIAASQAKTRHELGRSAFL 151
            :|||||||...::|.|.|.....|....||||.||||||||||||:.:...:..:||:|||..|:
  Fly   143 SLHLGHALTNAIEDAITRYHRMKGRTTLWVPGCDHAGIATQVVVEKLLWRDEKLSRHDLGREKFI 207

  Fly   152 DEVWRWKAEKGAGIVQDLRQLGCKLNWQREYFTMDEQQAHAVNVAFERLFEEGLIQRRNSVVNWC 216
            :.:|.|:.|||..|.:.|:.||...:|.|..||||.:...||..||.||.|||.|.|.:.:|||.
  Fly   208 ERIWDWRREKGGRIYEQLKSLGSSYDWTRVAFTMDPKLCRAVTEAFVRLHEEGSIYRSSRLVNWS 272

  Fly   217 TALRSAISDIEVDSVEITEPVEISVPGYDHKVLFGRMYDFAYHVVDGEALPDGSVEEIVVSTTRP 281
            ..|||||||||||.|||.....:|:|||:.||.||.:..|||.|       :||.|||:|:|||.
  Fly   273 CTLRSAISDIEVDKVEIPGRTFLSIPGYEDKVEFGVLIKFAYKV-------EGSDEEIIVATTRI 330

  Fly   282 ETILGDVAVAVHPLDPRYAKYRNIDQVKLKHPFRDDTIPLVFDITVDQEFGTGAVKITPAHDKFD 346
            ||:|||.||||||.|.|   |:::....:.|||....:|:|.|..||..|||||||||||||..|
  Fly   331 ETMLGDTAVAVHPQDDR---YKHLHGKFVVHPFSTRRLPIVCDEFVDMAFGTGAVKITPAHDPND 392

  Fly   347 FELATRHKLEPRQVFTETGLVVDAYSEYKGIPRFEARDLIVNRLEEMDLLRQVRSHTMQLPICSR 411
            :|:..|..|....:|.:.|.::..|.|:.|:.|||.|..|:.:|:.::|.|:..::.|.:|||||
  Fly   393 YEVGKRCNLPFITIFNDDGYIIGDYGEFTGMKRFECRKKILEKLKALNLYRETLNNPMVVPICSR 457

  Fly   412 SKDVIEYMILPQWFLKCKDLAKDALSELHSGRLQILPPNFETEWERWLQDSRDWCISRQLWWGHQ 476
            ||||:|.:|.|||::.|.|:|..|...:.||.|:|:|.:....|..|:...||||:||||||||:
  Fly   458 SKDVVEPLIKPQWYVSCSDMAASATEAVRSGELKIIPEHHTKTWYHWMDGIRDWCVSRQLWWGHR 522

  Fly   477 VPAYEVIDSQGNSQ---------------WVAALDEKTARQKAMRLIG--SEEFTLKRDPDVLDT 524
            :|||.|..:..:.|               |:.|..|..|..||....|  :.:..||:|.|||||
  Fly   523 IPAYHVSFTDPSLQTGSSAHGSVNDDEQYWIVARSEAEALTKAAERFGVDASKIVLKQDEDVLDT 587

  Fly   525 WFSSSLLPFSTAGWPEES--YKERYPLDIMQTGHDIIFFWVARMMMLGLKLTGEAPFQRILLNGI 587
            ||||.:.|||..|||:::  .:..||..:::|||||:|||||||:..|.||.|:.||:.:.|:.:
  Fly   588 WFSSGIFPFSVFGWPDQTKDLQTFYPTSLLETGHDILFFWVARMVFFGQKLLGKLPFKEVYLHPM 652

  Fly   588 VCDAHGRKMSKSIGNIVAPQQVVQGASLESLKAGLEQSCEAGIITPSELKASTIGMTQMFPNGIQ 652
            |.||||||||||:||::.|..|::|.:||.|.|.|..|    .:.|.|::.:..|..|.:|.||.
  Fly   653 VRDAHGRKMSKSLGNVIDPMDVIRGITLEGLHAQLVGS----NLDPREIEKAKAGQKQDYPQGIP 713

  Fly   653 ECGTDALRFTLMSHNIKSHFISFDVNACHTNKLFLNKVWQAMRFTL----GSAKGLGISLHQFET 713
            |||:|||||.|.::..::..|:.|:|.....:.|.||:|.|.:|.|    ||.|        |:|
  Fly   714 ECGSDALRFALCAYITQARDINLDINRVLGYRFFCNKLWNATKFALLYFTGSEK--------FDT 770

  Fly   714 LEGVNLGL--WDRWIVGRLAETLSVCSQSYSNYNFHLATAALKTFFYQYLCDTYLETTKPAIGNR 776
            ....:..:  .|.||:.|||..:..|:..:.:|:|..||:|...|:...|||.|||..||...:.
  Fly   771 ELSASAAINQMDAWILSRLAAAIEACNTGFESYDFAAATSACYAFWLYDLCDVYLECLKPIFQSG 835

  Fly   777 SADAYIHV-GTLTACLSWGLQAMAPYAPFVASELLQHVP-LNIELKL--------SDYKDEKLEE 831
            |.:..... .||..||.:||:.::|:.||:..||.|.:| .|....:        :.::..|:|.
  Fly   836 SEEQQTAARRTLYVCLDYGLRLLSPFMPFITEELYQRLPRANPAPSICVASYPSNTSWRSTKIES 900

  Fly   832 EVNEIVNICHNVRQVKSRNEISKRHHPQLSLFAQNTDSEGVLRRHLPQIKVLSRCEDVELELFD- 895
            :|..:......:|..:|...:..:...::.:...::....:|:|:...:..:|.|.:|   :|| 
  Fly   901 DVEFVQKAARIIRSARSDYNLPNKVKTEVYIVCTDSVPSEILKRYASDLATISYCSNV---VFDS 962

  Fly   896 -----------------------------ESSKISKQLSYF-STAGALCSFGLKLSDGLDLTPEK 930
                                         |.:|:.|:.... .|.|.|.. .::.:|.....|. 
  Fly   963 PAPQGCAILTVTGQCEVHLLLKGLVEADKEIAKLQKKSDQLVQTVGKLTQ-AIQAADYATKVPA- 1025

  Fly   931 RDEMQKANAKKLKKLVTELQRYRMRLDNEAFQLM 964
              |:|:||..||.:...|::|....:  |..:||
  Fly  1026 --EVQEANETKLCESRAEIERIAAAI--ETLKLM 1055

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ValRS-mNP_648268.1 PTZ00419 23..989 CDD:240411 380/1009 (38%)
ValRSNP_001260946.1 PTZ00419 80..1053 CDD:240411 378/1005 (38%)

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