DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ValRS-m and ValRS

DIOPT Version :10

Sequence 1:NP_648268.1 Gene:ValRS-m / 39023 FlyBaseID:FBgn0035942 Length:994 Species:Drosophila melanogaster
Sequence 2:XP_061513040.1 Gene:ValRS / 1272628 VectorBaseID:AGAMI1_008405 Length:1046 Species:Anopheles gambiae


Alignment Length:1022 Identity:377/1022 - (36%)
Similarity:555/1022 - (54%) Gaps:117/1022 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 KYLCQPRVYSLYYSTLKDAANE---LPLAAGYQPQPVENA---YWERE--------HRQANLPKA 65
            |.:.:.:|.::|..:.|:...:   .|....|.||.||.|   :||:|        .|:.|.|| 
Mosquito    58 KKVKETKVVAVYSGSTKEGEKKDLSGPFPDAYSPQYVEAAWYSWWEKEGFFKPEYGQRKLNNPK- 121

  Fly    66 SASSCKRGTYRMLLPPPNVTGNLHLGHALMATVQDVIARQREQLGYQVDWVPGTDHAGIATQVVV 130
                   |.:.|::|||||||:|||||||...::|.|.|.....|....||||.|||||||||||
Mosquito   122 -------GQFVMVIPPPNVTGSLHLGHALTNAIEDAITRWHRMKGRTTLWVPGCDHAGIATQVVV 179

  Fly   131 ERTIAASQAKTRHELGRSAFLDEVWRWKAEKGAGIVQDLRQLGCKLNWQREYFTMDEQQAHAVNV 195
            |:.:.....:|||:|||..|:|::|:|:.|||..|...|::||...:|.|..||||.:...||..
Mosquito   180 EKKLWREHKQTRHDLGREKFIDKIWQWRNEKGDRIYHQLKKLGSSFDWDRACFTMDPKLCKAVTE 244

  Fly   196 AFERLFEEGLIQRRNSVVNWCTALRSAISDIEVDSVEITEPVEISVPGYDHKVLFGRMYDFAYHV 260
            ||.|:.|.|:|.|.:.:|||...|||||||||||.||::...::|:|||..||.||.:..|||.|
Mosquito   245 AFVRMHEMGMIYRSSRLVNWSCTLRSAISDIEVDKVEVSGRTQLSIPGYADKVEFGVLVSFAYKV 309

  Fly   261 VDGEALPDGSVEEIVVSTTRPETILGDVAVAVHPLDPRYAKYRNIDQVKLKHPFRDDTIPLVFDI 325
            :..|:      :||||:|||.||:|||.||||||.|.|   |:::....::|||.|..:|:|.|.
Mosquito   310 IGSES------DEIVVATTRVETMLGDTAVAVHPKDTR---YQHLHGKFVQHPFCDRKLPIVCDE 365

  Fly   326 TVDQEFGTGAVKITPAHDKFDFELATRHKLEPRQVFTETGLVVDAYSEYKGIPRFEARDLIVNRL 390
            .|:..|||||||||||||..|:::..||.|....:|::.|::|..|..:.|:.||:||..|:..|
Mosquito   366 FVEMAFGTGAVKITPAHDPNDYDVGKRHNLPFITIFSDDGIIVGDYGSFTGMKRFDARKAILVAL 430

  Fly   391 EEMDLLRQVRSHTMQLPICSRSKDVIEYMILPQWFLKCKDLAKDALSELHSGRLQILPPNFETEW 455
            :|..|.|..:.:.|.:|:||||||::|.:|.|||::||.::|.:|...:.:|.|.|.|...:..|
Mosquito   431 QEKGLYRDTKDNPMVVPVCSRSKDIVEPLIKPQWYVKCSEMAANATEAVRTGALAITPDVHKKIW 495

  Fly   456 ERWLQDSRDWCISRQLWWGHQVPAYEVI---------DSQGNSQWVAALDEKTARQKAMRLIGSE 511
            ..|:.:.||||:||||||||::|||:|:         :....:.|.....|..|..||...:..:
Mosquito   496 YHWMDEIRDWCVSRQLWWGHRIPAYQVVFKDPAKAPKNLSDENLWFVGRTEAEALSKAASTLKVD 560

  Fly   512 E--FTLKRDPDVLDTWFSSSLLPFSTAGWPE--ESYKERYPLDIMQTGHDIIFFWVARMMMLGLK 572
            :  .::|:|.|||||||||.|.|||..|||:  :..|..||..:::|||||:|||||||:..|..
Mosquito   561 KALISMKQDEDVLDTWFSSGLFPFSVFGWPDNTDDLKLFYPTTLLETGHDILFFWVARMVFFGQT 625

  Fly   573 LTGEAPFQRILLNGIVCDAHGRKMSKSIGNIVAPQQVVQGASLESLKAGLEQSCEAGIITPSELK 637
            |.|:.||:.:.|:.:|.||||||||||:||::.|..|:.|.|||    ||.:......:.|.|::
Mosquito   626 LLGKLPFKEVFLHPMVRDAHGRKMSKSLGNVIDPMDVITGISLE----GLHKQLYDSNLDPREIE 686

  Fly   638 ASTIGMTQMFPNGIQECGTDALRFTLMSHNIKSHFISFDVNACHTNKLFLNKVWQAMRFTL---- 698
            .:..|..|.:||||.|||||||||.|.::..::..|:.|:......:.|.||:|.|.:|.|    
Mosquito   687 KAKAGQKQDYPNGIPECGTDALRFALCAYMTQARDINLDIQRVQGYRFFCNKLWNATKFALMYFP 751

  Fly   699 GSAKGLGISLHQFETLEGVNLGLWDRWIVGRLAETLSVCSQSYSNYNFHLATAALKTFFYQYLCD 763
            |:.|     .....:|:|:...| ||||:.|||..:...::.:..|.|.|||.|...|:...|||
Mosquito   752 GAEK-----YDIITSLDGLESNL-DRWILSRLAGCIETANRGFEKYEFALATNACYNFWLYDLCD 810

  Fly   764 TYLETTKPAI--GNRSADAYIHVGTLTACLSWGLQAMAPYAPFVASELLQHVPLN---------- 816
            .|||..|...  .:.||.|... .||..||:.||:.::|:.||:..||.|.:|..          
Mosquito   811 VYLECLKSVFQTNDESAKASAR-RTLYTCLNLGLKLLSPFMPFITEELYQRLPRGDFATVASICV 874

  Fly   817 ---IELKLSDYKDEKLEEEVNEIVNICHNVRQVKSRNEISKRHHPQLSLFAQNTDSEGVLRRHLP 878
               .|...|.:|||.:|:....:.....::|..:|...|..:..........:......|.|...
Mosquito   875 ASYPEQTDSPWKDESIEKGFEFVQKTARDIRSARSDYNIPNKTKTDAYFICSDEGVRSALERFTL 939

  Fly   879 QIKVLS---------------------RC-----------EDVELELFDESSKISKQ-LSYFSTA 910
            :::.::                     :|           .|.|:|...:..:..:| ::....|
Mosquito   940 ELETMAFSQVHFGTVPPAGCAILTISGQCVVHLMLKGLIEVDKEIEKMTKKQEALQQTIAKLQQA 1004

  Fly   911 GALCSFGLKLSDGLDLTPEKRDEMQKANAKKLKKLVTELQRYRMRLD 957
            .|:.::..|:       ||   :::|||.:||.:...|::|....:|
Mosquito  1005 MAVPNYANKV-------PE---DVRKANVEKLDQSKVEIERLSSAID 1041

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ValRS-mNP_648268.1 PTZ00419 23..989 CDD:240411 375/1014 (37%)
ValRSXP_061513040.1 None

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