DRSC/TRiP Functional Genomics Resources

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Protein Alignment ValRS-m and vars1

DIOPT Version :10

Sequence 1:NP_648268.1 Gene:ValRS-m / 39023 FlyBaseID:FBgn0035942 Length:994 Species:Drosophila melanogaster
Sequence 2:XP_002939512.3 Gene:vars1 / 100489760 XenbaseID:XB-GENE-487344 Length:1243 Species:Xenopus tropicalis


Alignment Length:1003 Identity:394/1003 - (39%)
Similarity:576/1003 - (57%) Gaps:79/1003 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 KDAANELPLAAGYQPQPVENA---YWEREHRQANLPKASASSCK----RGTYRMLLPPPNVTGNL 88
            ||.:.  |:...|.||.||:|   :||:|  :...|:...||..    :|.:.|.:|||||||:|
 Frog   271 KDVSG--PMPDSYSPQYVESAWYSWWEKE--KFFKPEFGRSSISEPNPKGLFMMCIPPPNVTGSL 331

  Fly    89 HLGHALMATVQDVIARQREQLGYQVDWVPGTDHAGIATQVVVERTIAASQAKTRHELGRSAFLDE 153
            ||||||...:||.:.|.....|....|.||.||||||||||||:.:...:.||||:.||..|::|
 Frog   332 HLGHALTNAIQDCLTRWHRMRGELTLWNPGCDHAGIATQVVVEKKLWRERGKTRHDFGRENFIEE 396

  Fly   154 VWRWKAEKGAGIVQDLRQLGCKLNWQREYFTMDEQQAHAVNVAFERLFEEGLIQRRNSVVNWCTA 218
            ||:||.|||..|...||.||..|:|.|..||||.:.:.||..||.||.|.|:|.|...:|||...
 Frog   397 VWKWKREKGDRIYHQLRILGSSLDWDRTCFTMDPKLSFAVQEAFIRLHEAGIIYRSKRLVNWSCT 461

  Fly   219 LRSAISDIEVDSVEITEPVEISVPGYDHKVLFGRMYDFAYHVVDGEALPDGSVEEIVVSTTRPET 283
            |.|||||||||..|::....:.||||...|.||.:..|||.|.:       :.|||||:|||.||
 Frog   462 LNSAISDIEVDKKELSGRTLLPVPGYKQGVEFGVLVSFAYKVQE-------TGEEIVVATTRVET 519

  Fly   284 ILGDVAVAVHPLDPRYAKYRNIDQVKLKHPFRDDTIPLVFDITVDQEFGTGAVKITPAHDKFDFE 348
            :|||.||||||.|.|   |:::....:.|||....:|:|||..||..|||||||||||||..|:|
 Frog   520 MLGDTAVAVHPQDQR---YKHLKGHHVLHPFCSRLLPIVFDEFVDMSFGTGAVKITPAHDPTDYE 581

  Fly   349 LATRHKLEPRQVFTETGLVVDAYSEYKGIPRFEARDLIVNRLEEMDLLRQVRSHTMQLPICSRSK 413
            :..||.|:...:..:.|.:::....:.|:.||:||..:::.|:|..|.::|:.:.|.:|:|||||
 Frog   582 VGMRHSLDFVNIMDDNGTLINVPQPFLGMKRFDARKAVLDALKEKGLFKEVKDNPMVVPVCSRSK 646

  Fly   414 DVIEYMILPQWFLKCKDLAKDALSELHSGRLQILPPNFETE-WERWLQDSRDWCISRQLWWGHQV 477
            |::|.::.|||:::|.::.|.|...:..|.| ::.|.|.|: |..|:.:.|||||||||||||::
 Frog   647 DIVEPLLKPQWYVRCDEMGKRAADAVRDGHL-LIKPEFHTKTWFIWMDNIRDWCISRQLWWGHRI 710

  Fly   478 PAYEVI----------DSQGNSQWVAALDEKTARQKAMRL--IGSEEFTLKRDPDVLDTWFSSSL 530
            |||.|.          |:.| ..|::...|:.|::||.|:  :..|:.:|::|.|||||||||.:
 Frog   711 PAYFVTVNDPSVPAGEDTDG-KYWISGRSEQEAKEKAARVFNVAPEKISLRQDDDVLDTWFSSGI 774

  Fly   531 LPFSTAGWPE--ESYKERYPLDIMQTGHDIIFFWVARMMMLGLKLTGEAPFQRILLNGIVCDAHG 593
            .|||..|||.  |.....||..:::|||||:|||||||:||||.|||:.||:.:.|:.:|.||||
 Frog   775 FPFSIFGWPNQTEDLNVFYPGTLLETGHDILFFWVARMVMLGLTLTGKLPFKEVYLHAVVRDAHG 839

  Fly   594 RKMSKSIGNIVAPQQVVQGASLESLKAGLEQSCEAGIITPSELKASTIGMTQMFPNGIQECGTDA 658
            ||||||:||::.|..|:.|.:||.|...|.:|    .:.|:||:.:..|....:||||.||||||
 Frog   840 RKMSKSLGNVIDPLDVINGITLEGLNKQLLES----NLDPAELERAKDGQKSDYPNGIPECGTDA 900

  Fly   659 LRFTLMSHNIKSHFISFDVNACHTNKLFLNKVWQAMRFTLGSAKGLG--ISLHQFETLEGVNLGL 721
            |||.|.::..:...|:.|||.....:.|.||:|.|.:|.:   ||||  .|...|....|.. .|
 Frog   901 LRFALCAYTSQGRDINLDVNRILGYRHFCNKIWNATKFAM---KGLGDNYSPPDFAGACGQE-SL 961

  Fly   722 WDRWIVGRLAETLSVCSQSYSNYNFHLATAALKTFFYQYLCDTYLETTKPAIGNRSADAYIHVG- 785
            .||||:.||:..:.:|:..:.||:|...|.|:..|:...|||.|||..||...: |.:|.|.|| 
 Frog   962 ADRWILSRLSFAVDLCNNGFQNYDFPGITTAVYNFWLYELCDVYLECLKPVFLS-SDEAAISVGR 1025

  Fly   786 -TLTACLSWGLQAMAPYAPFVASELLQHVP---------LNI----ELKLSDYKDEKLEEEVNEI 836
             ||..||..||:.::|:.||:..||.|.:|         :::    |....:::||::|..::..
 Frog  1026 NTLYTCLDAGLRLLSPFMPFLTEELYQRLPRRSSSRTPSISVTSYPETSECNWRDEEIERNMDLA 1090

  Fly   837 VNICHNVRQVKSRNEISKRHHPQLSLF--AQNTDSEGVLRRHLPQIKVLSRCED-VELELFDESS 898
            :.|..::|.:::...::|   .:...|  .|:.|:..|:..:...|.|||.... |.|:..|.:.
 Frog  1091 LLIVKSIRSLRADYNLTK---TKADCFVQCQDADTVSVVTAYTSFITVLSSSRSLVTLKAQDPAP 1152

  Fly   899 KISKQLSYFSTAGALCSFGLKLSDGLDLTPEKRDEMQKANAKKLKKLVTELQRYRMRLDNEAFQL 963
            ..|.    .:||....:..:.|...:|:  ||  |:.|...|| .:|..:|::.|.|:.:..::.
 Frog  1153 AGSA----VNTASDKATVYVVLKGLIDV--EK--ELAKLQVKK-TELGRQLEKLRERMGSADYRS 1208

  Fly   964 MADKKVKSHFENKVKELEAEINSLTRLA 991
            ...:.|:.....::::.|.|...:...|
 Frog  1209 KVPETVQQQDAERIRQTETEFKKVNEAA 1236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ValRS-mNP_648268.1 PTZ00419 23..989 CDD:240411 393/999 (39%)
vars1XP_002939512.3 GST_C_family 79..192 CDD:470672
PTZ00419 263..1242 CDD:240411 394/1003 (39%)
Blue background indicates that the domain is not in the aligned region.

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