DRSC/TRiP Functional Genomics Resources

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Protein Alignment GNBP3 and KRE6

DIOPT Version :9

Sequence 1:NP_523986.2 Gene:GNBP3 / 39020 FlyBaseID:FBgn0040321 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_015485.1 Gene:KRE6 / 856287 SGDID:S000006363 Length:720 Species:Saccharomyces cerevisiae


Alignment Length:462 Identity:93/462 - (20%)
Similarity:131/462 - (28%) Gaps:223/462 - (48%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 TPPADPDIDIRLGCTTPKTEVNGAPTRCA-----GQLVFVDEFNAAKL-----DPNKWKAERRFS 198
            |...|||        ||.|    |.||.|     .:|||.|||||...     |...|.|     
Yeast   304 TSLVDPD--------TPDT----AKTREAMDGSKWELVFSDEFNAEGRTFYDGDDPYWTA----- 351

  Fly   199 GQPDYEFNV------YVDDAPETLCLANGHVVLSTNTMKKQ---FKKGSGESLDLGEKCTGQANT 254
              ||..::.      |..||..|:   ||.:.|..:..|..   ::.|..:|.:  :.|      
Yeast   352 --PDVHYDATKDLEWYSPDASTTV---NGTLQLRMDAFKNHGLYYRSGMLQSWN--KVC------ 403

  Fly   255 HDCVRNGRTLNDGLPPMVTAQFSSKDFSFKYGRVEVRAKMP---RAQWVTPQIWLQPR--RPIY- 313
                                        |..|.:|:.|.:|   |...:.|.:|....  ||.| 
Yeast   404 ----------------------------FTQGALEISANLPNYGRVSGLWPGLWTMGNLGRPGYL 440

  Fly   314 ----GVDDYRSGQLRIAYTRPNGGNLDLYGAAVLFADEPLRSVKNCLKPGTGNNSEDWSDSFHNY 374
                ||..|.........| ||..:.|  |.:.|    |.:.:..|                   
Yeast   441 ASTQGVWPYSYESCDAGIT-PNQSSPD--GISYL----PGQKLSIC------------------- 479

  Fly   375 TLEWTPRELRWLVDGKEWCVQGSAKGSFSETTAAGKSLPQAQKLEE------GTG-------LAP 426
                       ..||::...||           .|:..|:...||.      |.|       :||
Yeast   480 -----------TCDGEDHPNQG-----------VGRGAPEIDVLEGETDTKIGVGIASQSLQIAP 522

  Fly   427 FD---------QEFY----LTFGLSVGG------------------FNEY-----QHEIKPWNER 455
            ||         .|.|    .|.....||                  |.||     ::.|:..|:.
Yeast   523 FDIWYMPDYDFIEVYNFTTTTMNTYAGGPFQQAVSAVSTLNVTWYEFGEYGGYFQKYAIEYLNDD 587

  Fly   456 APQAQKAF---------------------WKEVKK----------IRDHW--LDEGH------MK 481
            .....:.|                     |:.:.|          |.::|  :|..:      |.
Yeast   588 DNGYIRWFVGDTPTYTIHAKALHPDGNIGWRRISKEPMSIILNLGISNNWAYIDWQYIFFPVVMS 652

  Fly   482 IDYVKVY 488
            ||||::|
Yeast   653 IDYVRIY 659

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GNBP3NP_523986.2 CBM39 27..132 CDD:292510
GH16_beta_GRP 175..489 CDD:185688 82/426 (19%)
KRE6NP_015485.1 SKN1 209..711 CDD:397841 93/462 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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