Protein Alignment GNBP3 and SKN1

DIOPT Version :9

• Sequence 1: NP_523986.2
• Gene: GNBP3 / 39020
• FlyBaseID: FBgn0040321
• Length: 490
• Species: Drosophila melanogaster
• Sequence 2: NP_011659.3
• Gene: SKN1 / 853045
• SGDID: S000003375
• Length: 771
• Species: Saccharomyces cerevisiae
• Alignment Length: 475
• Identity: 104/475 - (21%)
• Similarity: 161/475 - (33%)
• Gaps: 167/475 - (35%)

  Fly   105 VIYNGLGYREDDGSFVVN--GYSGNNAS-------PHPPVVPVSTTPWTPPADPDIDIRLGCTTP 160
            :.::|:.|..:. ....|  |.|.:|.:       .:|.:..:.||    ..|||        ||
Yeast   313 ITFSGVVYHHEH-VHAANSAGSSSSNTTSKSLTEYQYPQLAAIRTT----LVDPD--------TP 364

  Fly   161 KTEVNGAPTRCA-----GQLVFVDEFNAAKL-----DPNKWKAERRFSGQPDYEFNVYVD---DA 212
                :.|.||.|     .||||.|||||...     |...|.|       ||..::...|   .:
Yeast   365 ----DSAKTRVAKDGSKWQLVFSDEFNAEGRTFYDGDDQFWTA-------PDIHYDATKDLEWYS 418

  Fly   213 PETLCLANGHVVLSTNTMKKQFKKGSGESLDLGEKCTGQANTHDC-VRNGRTLNDGLPPMVTAQF 276
            |:.:...||.:.|..:..:                      .||. .|:|         ||.
Yeast   419 PDAVTTTNGTLTLRMDAFR----------------------NHDLYYRSG---------MVQ--- 449

  Fly   277 SSKDFSFKYGRVEVRAKMPRAQWVT---PQIWLQPR--RPIY-----GVDDYRSGQLRIAYTRPN 331
            |.....|..|.:||.|.:|....||   |.:|....  ||.|     ||..| |.:...|...||
Yeast   450 SWNKLCFTEGALEVSANLPNYGRVTGLWPGMWTMGNLGRPGYLASTQGVWPY-SYEACDAGITPN 513

  Fly   332 GGNLDLYGAAVLFADEPLRSVKNCL-------KPGTGNNS------EDWSDSF-----HNYTLEW 378
            ..:.|  |.:.|    |.:.:..|.       ..|.|..:      |..:|:.     .:.:|:.
Yeast   514 QSSPD--GISYL----PGQKLSVCTCDNEDHPNQGVGRGAPEIDILEGEADTILGVGVASQSLQI 572

  Fly   379 TPRELRWLVDGKEWCVQGSAKGSFSETTA---AGKSLPQAQKLEEGTGLAPFDQEFYLTFGLSVG 440
            .|.::.::.|.....|.     :|:.||.   ||....||.     :.::..:..:| .||...|
Yeast   573 APFDIWYMPDYDFIEVY-----NFTTTTMNTYAGGPFQQAV-----SAISTLNVTWY-EFGEEAG 626

  Fly   441 GFNEYQHE---------IKPWNERAP----------QAQKAFWKEVKK----------IRDHW-- 474
            .|.:|..|         |:.:....|          .:....|:.:.|          |.::|
Yeast   627 YFQKYAIEYLNDDDNGYIRWFVGENPTFTLYATSLHPSGNIDWRRISKEPMSAILNLGISNNWAY 691

  Fly   475 LDEGH------MKIDYVKVY 488
            :|..:      |.||||::|
Yeast   692 IDWQYIFFPVTMSIDYVRLY 711

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
GNBP3	NP_523986.2	CBM39	27..132	CDD:292510	6/35 (17%)
		GH16_beta_GRP	175..489	CDD:185688	85/391 (22%)
SKN1	NP_011659.3	SKN1	249..763	CDD:397841	104/475 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG2273
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900