DRSC/TRiP Functional Genomics Resources

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Protein Alignment GNBP3 and XTH6

DIOPT Version :10

Sequence 1:NP_523986.2 Gene:GNBP3 / 39020 FlyBaseID:FBgn0040321 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_569019.1 Gene:XTH6 / 836702 AraportID:AT5G65730 Length:292 Species:Arabidopsis thaliana


Alignment Length:332 Identity:71/332 - (21%)
Similarity:102/332 - (30%) Gaps:113/332 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   207 VYVDDAPETLCLANG--------HVVLSTNTMKKQFKKGSGESLDLGEKCTGQANTHDCVRNGRT 263
            :|....|.||||...        .|.....|..:.||....||                  :.|.
plant     4 IYSPSFPGTLCLCIFTLLTLMFIRVSARPATFVEDFKAAWSES------------------HIRQ 50

  Fly   264 LNDG------LPPMVTAQFSSKDFSFKYGRVEVRAKM---PRAQWVTPQIWLQPRRPIYGVDDY- 318
            :.||      |.......|:||. .:.:|||.::.|:   ..|..||..........:....|: 
plant    51 MEDGKAIQLVLDQSTGCGFASKR-KYLFGRVSMKIKLIPGDSAGTVTAFYMNSDTATVRDELDFE 114

  Fly   319 ----RSGQLRIAYTRPNGGNLDLYGAAVLFADEPLRSVKNCLKPGTGNNSED---WSD---SFHN 373
                ||||                         |.....|....|.|:..:.   |.|   .:|.
plant   115 FLGNRSGQ-------------------------PYSVQTNIFAHGKGDREQRVNLWFDPSMDYHT 154

  Fly   374 YTLEWTPRELRWLVDG---KEWCVQGSAKGSFSETTAAGKSLP--------QAQKLEEGTGL--- 424
            ||:.|:.:.:.:.||.   :|:      |.:.::..|...|.|        :|.......||   
plant   155 YTILWSHKHIVFYVDDVPIREY------KNNEAKNIAYPTSQPMGVYSTLWEADDWATRGGLEKI 213

  Fly   425 ----APFDQEFYLTF---GLSVGG-----FNEYQHEIKPWNERAPQAQKAFWKEVKKIRDHWLDE 477
                ||| ..:|..|   |..|.|     .|.:..    |...|.|:..|    |:..|..|:..
plant   214 DWSKAPF-YAYYKDFDIEGCPVPGPTFCPSNPHNW----WEGYAYQSLNA----VEARRYRWVRV 269

  Fly   478 GHMKIDY 484
            .||..||
plant   270 NHMVYDY 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GNBP3NP_523986.2 CBM39 27..132 CDD:464924
GH16_beta_GRP 175..489 CDD:185688 71/332 (21%)
XTH6NP_569019.1 GH16_XET 33..290 CDD:185685 64/303 (21%)
Blue background indicates that the domain is not in the aligned region.

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