DRSC/TRiP Functional Genomics Resources

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Protein Alignment GNBP3 and XTH19

DIOPT Version :10

Sequence 1:NP_523986.2 Gene:GNBP3 / 39020 FlyBaseID:FBgn0040321 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_194758.1 Gene:XTH19 / 829152 AraportID:AT4G30290 Length:277 Species:Arabidopsis thaliana


Alignment Length:250 Identity:52/250 - (20%)
Similarity:82/250 - (32%) Gaps:58/250 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   250 GQANTHDCVRNGRTLNDGLPPMVTAQFSSKDFSFKYGRVEVRAKMPRAQWVTPQIWLQPRRPIYG 314
            |:...||  ..|:.|:..|.....:.|.|.. .|.||:.||:.|:                    
plant    35 GRGKIHD--NQGKLLSLSLDKSSGSGFQSNQ-EFLYGKAEVQMKL-------------------- 76

  Fly   315 VDDYRSGQLRIAYTRPNGGNLDLYGAAVL--FADEPLRSVKNCLKPGTGNNSED---WSD---SF 371
            |....:|.:...|.:..|...|......|  .:..|.....|....|:|:..:.   |.|   :|
plant    77 VPGNSAGTVTTFYLKSPGTTWDEIDFEFLGNISGHPYTLHTNVYTKGSGDKEQQFHLWFDPTANF 141

  Fly   372 HNYTLEWTPRELRWLVDG---KEWCVQGSAKGSFSETTAAGKSLPQAQKLEEGTGLAPFDQEFYL 433
            |.|.:.|.|:.:.:.|||   :|          |....:.|...|..|.:.....|  ::.|.:.
plant   142 HTYCITWNPQRIIFTVDGIPIRE----------FMNAESRGVPFPTKQPMRLYASL--WEAEHWA 194

  Fly   434 TFGLSVGGFNEYQHEIKPWNE--RAPQAQKAFW---KEVKKIRDHWLDEGHMKID 483
            |    .||..:......|:..  |....:...|   |.|......|..:   |:|
plant   195 T----RGGLEKTDWSKAPFTAYYRNYNVEGCVWVNGKSVCPANSQWFTQ---KLD 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GNBP3NP_523986.2 CBM39 27..132 CDD:464924
GH16_beta_GRP 175..489 CDD:185688 51/249 (20%)
XTH19NP_194758.1 GH16_XET 20..276 CDD:185685 51/249 (20%)
Blue background indicates that the domain is not in the aligned region.

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