DRSC/TRiP Functional Genomics Resources

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Protein Alignment GNBP3 and XTH4

DIOPT Version :10

Sequence 1:NP_523986.2 Gene:GNBP3 / 39020 FlyBaseID:FBgn0040321 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_178708.1 Gene:XTH4 / 815247 AraportID:AT2G06850 Length:296 Species:Arabidopsis thaliana


Alignment Length:286 Identity:58/286 - (20%)
Similarity:87/286 - (30%) Gaps:104/286 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   231 KKQFKKGSGESLDLGEKCTGQANTHDCVRNGRTLNDGLPPMVTAQFSSKDFSFKYGRVEVRAKMP 295
            :|||..||...|.| :|.||..                       |.||. |:.:|...:..|:|
plant    48 QKQFNGGSELQLIL-DKYTGTG-----------------------FQSKG-SYLFGHFSMHIKLP 87

  Fly   296 RAQ--WVTPQIWLQPRRPIYGVDDY-----RSGQLRIAYTRPNGGNLDLYGAAVLFADEPLRSVK 353
            ...  .|....:|......:...|:     |:||..|..|                         
plant    88 AGDTAGVVTAFYLSSTNNEHDEIDFEFLGNRTGQPAILQT------------------------- 127

  Fly   354 NCLKPGTGNNSE------DWSDSFHNYTLEWTPRELRWLVDGKEWCVQGSAKG-----SFSETTA 407
            |....|.||..:      |.|.::|.|::.|...::.:.||........:||.     .|::...
plant   128 NVFTGGKGNREQRIYLWFDPSKAYHTYSILWNMYQIVFFVDNIPIRTFKNAKDLGVRFPFNQPMK 192

  Fly   408 AGKSLPQAQKLEEGTGL-------APFDQEFYLTFGLSVGGFNEYQHEIKP----------WNER 455
            ...||..|.......||       |||...:.   |..:.|   .|..::.          |:  
plant   193 LYSSLWNADDWATRGGLEKTNWANAPFVASYK---GFHIDG---CQASVEAKYCATQGRMWWD-- 249

  Fly   456 APQAQKAF-------WKEVKKIRDHW 474
                ||.|       |:.:|.:|..|
plant   250 ----QKEFRDLDAEQWRRLKWVRMKW 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GNBP3NP_523986.2 CBM39 27..132 CDD:464924
GH16_beta_GRP 175..489 CDD:185688 58/286 (20%)
XTH4NP_178708.1 GH16_XET 30..290 CDD:185685 58/286 (20%)
Blue background indicates that the domain is not in the aligned region.

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