DRSC/TRiP Functional Genomics Resources

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Protein Alignment LAG3 and zgc:112965

DIOPT Version :9

Sequence 1:NP_002277.4 Gene:LAG3 / 3902 HGNCID:6476 Length:525 Species:Homo sapiens
Sequence 2:NP_001018542.1 Gene:zgc:112965 / 553735 ZFINID:ZDB-GENE-050522-10 Length:325 Species:Danio rerio


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LAG3NP_002277.4 Interaction with FGL1. /evidence=ECO:0000269|PubMed:30580966, ECO:0000269|PubMed:9159144 37..252
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 62..97
Ig_2 174..259 CDD:290606
IG_like 185..259 CDD:214653
Ig 263..336 CDD:299845
IG_like 267..348 CDD:214653
Connecting peptide. /evidence=ECO:0000250|UniProtKB:Q61790 429..450
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 487..525
KIEELE motif. /evidence=ECO:0000250|UniProtKB:Q61790 498..503
12 X 2 AA tandem repeats of E-X 501..524
zgc:112965NP_001018542.1 IG_like 36..141 CDD:214653
Ig 44..141 CDD:299845
V-set 151..250 CDD:284989
IG_like 153..257 CDD:214653
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
NCBI 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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