Protein Alignment orb2 and AT1G17820

DIOPT Version :10

• Sequence 1: NP_001356977.1
• Gene: orb2 / 39018
• FlyBaseID: FBgn0264307
• Length: 769
• Species: Drosophila melanogaster
• Sequence 2: NP_173224.2
• Gene: AT1G17820 / 838360
• AraportID: AT1G17820
• Length: 803
• Species: Arabidopsis thaliana
• Alignment Length: 280
• Identity: 56/280 - (20%)
• Similarity: 85/280 - (30%)
• Gaps: 111/280 - (39%)

  Fly   409 YLNALKMGSPSRLSPHSPHSPIQGGNGGNVGDGTA--------RFSRKVFVGGLPPDIDEDEITT 465
            |:.:|.:..||.:.|....| .:..:.||..||::        :||||       ....||..|.
plant   215 YVTSLNVAYPSFMKPSLGFS-FETLDKGNRTDGSSSKVRLFLKKFSRK-------RSNREDRKTY 271

  Fly   466 SFRRFGPLVVDWPHKAESKSYFPPK-----------------------GYAFLLFQDESSVQQLI 507
            |.           |.:.|...||.|                       |.:.|....:...::.:
plant   272 SH-----------HGSSSGKCFPGKNNMTDDTDVPIFSRSVSHSSHISGVSHLSGVSDGDSEEKV 325

  Fly   508 DSCITDE---------DKLYLCVSSPTIKDKAVQIRPWRLAD----ADYVLDATMSLDPRKTVFV 559
            |   .||         .:|:..:...|....:||.|..||..    ..|:.:...|     .|..
plant   326 D---MDEGTLALNLLISRLFFDLKRKTGVKNSVQARIQRLLSNMRTPSYIGELICS-----DVDT 382

  Fly   560 GGVP--------RPLK-----AFELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYI 611
            |.:|        .|::     ||||    |..|.|.....::|
plant   383 GNLPPHIHATRVLPMEMSGVWAFEL----DIEYSGDVVIDVET---------------------- 421

  Fly   612 AAISARFVQLQHGDIDKRVE 631
             .:..|.|.||.|..|.|::
plant   422 -RVDIREVDLQQGITDTRLQ 440

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
orb2	NP_001356977.1	RRM1_CPEB2_like	447..538	CDD:410123	21/122 (17%)
		RRM2_CPEB2_like	555..635	CDD:410125	19/90 (21%)
		CEBP_ZZ	630..691	CDD:465105	0/2 (0%)
AT1G17820	NP_173224.2	SMP_TEX2	334..597	CDD:439231	28/139 (20%)