Sequence 1: | NP_001356977.1 | Gene: | orb2 / 39018 | FlyBaseID: | FBgn0264307 | Length: | 769 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001262870.1 | Gene: | orb / 42752 | FlyBaseID: | FBgn0004882 | Length: | 915 | Species: | Drosophila melanogaster |
Alignment Length: | 846 | Identity: | 233/846 - (27%) |
---|---|---|---|
Similarity: | 352/846 - (41%) | Gaps: | 231/846 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MDSLKLPKANSATSSASGSNSNLSGSTSASASAATSPTSSGTAVG-------------------- 45
Fly 46 -------GILSGAPKSPPGLGSSTPISVRFNANEESLDDILQSFHHSK--HSPSGGASGGGDASP 101
Fly 102 TSNL------------------LG-MKNNGLGLVVGNCDSLSSSPSQPQMHAGSASLFGNDEVSL 147
Fly 148 RNNFMQAGGFFNRKSCGGLPNLNLNKPPQLHQQQHQQQHQQHQQHQQQQQLHQHQQQLSPNLSAL 212
Fly 213 HHHHQQQQQ---LRESGGSHSPSSPGGGGGGSPYNGSQAGCSSGG------------ISPIPPQM 262
Fly 263 GVSPKYRRSISFPIKGNSPTAIYGNMHMDGMGSGHMNIPTLSIGNGGGGGSTGMVSAGATGGGDA 327
Fly 328 PYLGNSYGNMMTSNGQMHHGGGLDNSLCDYMRNMSLGGNGGG-----DGSNSMSLMQDRMRVMGG 387
Fly 388 PKHLSEADAMAIAA---SGNDPSVYLNALKMGSPSRLSPHSPHSPIQGGNGGNVGDGTARFSRKV 449
Fly 450 FVGGLPPDIDEDEITTSFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQDESSVQQLIDSCITDE 514
Fly 515 D------KLYLCVSSPTIKDKAVQIRPWRLADADYVLDATMSLDPRKTVFVGGVPRPLKAFELAM 573
Fly 574 IMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHGDIDKRVEVKPYVLD 638
Fly 639 DQMCDECEGQRCGGKFAPFFCANVTCLQYYCEHCWAVIHSRPGREYHKPLVKEGADRPR------ 697
Fly 698 ----AVPF---RWCXRRRWXAALHDERRQQ--REQRHRLLNAALAVPRIITESSGSGGVAEGAGV 753
Fly 754 A 754 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
orb2 | NP_001356977.1 | RRM1_CPEB2_like | 447..538 | CDD:241168 | 33/96 (34%) |
RRM2_CPEB2_like | 555..635 | CDD:241170 | 41/79 (52%) | ||
CEBP_ZZ | 630..691 | CDD:318563 | 22/60 (37%) | ||
orb | NP_001262870.1 | CEBP1_N | <540..570 | CDD:292978 | 10/51 (20%) |
RRM1_CPEB1 | 574..674 | CDD:241167 | 35/101 (35%) | ||
RRM2_CPEB1 | 685..770 | CDD:241169 | 46/86 (53%) | ||
CEBP_ZZ | 762..817 | CDD:292976 | 22/60 (37%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45437685 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG0129 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR12566 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.840 |