Protein Alignment orb2 and cpb-2

DIOPT Version :9

• Sequence 1: NP_001356977.1
• Gene: orb2 / 39018
• FlyBaseID: FBgn0264307
• Length: 769
• Species: Drosophila melanogaster
• Sequence 2: NP_495236.3
• Gene: cpb-2 / 174027
• WormBaseID: WBGene00000771
• Length: 570
• Species: Caenorhabditis elegans
• Alignment Length: 345
• Identity: 125/345 - (36%)
• Similarity: 168/345 - (48%)
• Gaps: 95/345 - (27%)

  Fly   437 NVGDGTARFSRKVFVGGLPPDIDEDEITTSFRRFGPLVVDWPHK----------------AESKS 485
            |||...  :||||||||||..:.|.:|...|.|:|.|.||||.|                ..|.|
 Worm   228 NVGPEV--YSRKVFVGGLPSCVKESDILNFFSRYGRLQVDWPSKHYECKSDSDPSLCNEPISSSS 290

  Fly   486 YFPPK------------------------------------------------------------ 490
            |.|..
 Worm   291 YQPSSHLAMVSPPFGEINPFMRNMPAQSESSQTGGFGRISSGSIGGFLNPGMAQVARGNLGFGST 355

  Fly   491 ---------------GYAFLLFQDESSVQQLIDSCITDEDKLYLCVSSPTIKDKAVQIRPWRLAD 540
                           ||.||||:.|.||:.|:..|..:|:.|::.:.|.|...: ||||||.|||
 Worm   356 KSDGSINGDKRQHHLGYVFLLFEKERSVRDLVLDCFEEEEGLFITLESSTDSIR-VQIRPWLLAD 419

  Fly   541 ADYVLDATMSLDPRKTVFVGGVPRPLKAFELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFS 605
            |::::|..:.::.:...|:|||||||||.|||...::.||.|...|||.|.:.|||:|:||||||
 Worm   420 AEFLMDFNVPINTKLVAFIGGVPRPLKAVELAHFFEQTYGHVVCVGIDIDNKFKYPRGSGRVAFS 484

  Fly   606 NQQSYIAAISARFVQLQHGDIDKRVEVKPYVLDDQMCDECEGQRCGGKFAPFFCANVTCLQYYCE 670
            :..:|:.||:.|::.|.|.||.||||:|||...:|.|:||.| |...:.||:||.::.|.|||||
 Worm   485 DYDAYVQAITDRYIVLDHEDIHKRVEIKPYFFHNQSCEECSG-RYHRQHAPYFCPSLECFQYYCE 548

  Fly   671 HCWAVIHSRPGREYHKPLVK 690
            .||..:||.|.|.:|.|:||
 Worm   549 PCWHKMHSHPSRFHHMPVVK 568

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
orb2	NP_001356977.1	RRM1_CPEB2_like	447..538	CDD:241168	45/181 (25%)
		RRM2_CPEB2_like	555..635	CDD:241170	43/79 (54%)
		CEBP_ZZ	630..691	CDD:318563	31/61 (51%)
cpb-2	NP_495236.3	RRM1_CPEBs	236..417	CDD:240890	45/181 (25%)
		RRM2_CPEB2_like	434..514	CDD:241170	43/79 (54%)
		CEBP_ZZ	509..568	CDD:292976	29/59 (49%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160166676
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0129
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	1	0.950	-	0.928771	Normalized mean entropy	S3563
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	LDO	PTHR12566
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	6	5.790