Protein Alignment orb2 and cpeb2

DIOPT Version :10

• Sequence 1: NP_001356977.1
• Gene: orb2 / 39018
• FlyBaseID: FBgn0264307
• Length: 769
• Species: Drosophila melanogaster
• Sequence 2: XP_002666445.3
• Gene: cpeb2 / 100330483
• ZFINID: ZDB-GENE-130530-639
• Length: 727
• Species: Danio rerio
• Alignment Length: 770
• Identity: 331/770 - (42%)
• Similarity: 398/770 - (51%)
• Gaps: 178/770 - (23%)

  Fly     7 PKANSATSSASGSNSNLSGSTSASASA------------------ATSPTSSGTAVGGILSGAPK 53
            |...:|:.|:|..:|..|.:..|..:.                  ::|.:||.::..|:.:.||.
Zfish    62 PAGLTASQSSSEQSSRFSAAGHAQTAGDLQHDRNIHQQADPQPPYSSSSSSSSSSSTGLDTDAPS 126

  Fly    54 SPPGLGSSTPISVRFNANEESLDDILQSFHHSKHSPSGGASGGGDASPTSNLLGMKNNGLGLVVG 118
            |...:...:|.:...| |....:::|........:..||  |||.||||....|..
Zfish   127 SKVNIQMESPSAHHIN-NGTGANNMLAGAFPEMQNAGGG--GGGSASPTLPAFGTP--------- 179

  Fly   119 NCDSLSSSPSQPQMHAGSASLFGNDEVSLRNNFMQAG-------GFFNRKSCGGLP--------N 168
             ....:|||..|.  :.||:.......:...:....|       |||...|....|        :
Zfish   180 -WSVQTSSPPPPV--SNSANAINPIPATTEPDTYYPGIPSSINPGFFQSFSANPCPVQGFSSPFS 241

  Fly   169 LNLNKPPQLHQQQHQQQHQQHQQHQQQQQLHQHQQQLSPNLSALHHHHQQQQQLRESGGSHSPSS 233
            ..:|.|||  .|..:.........|||....||:..        ::|||...:          .|
Zfish   242 PQINVPPQ--PQSRRSPVSPQIPPQQQGAFLQHRNN--------YNHHQPMMK----------QS 286

  Fly   234 PGGGGGGSPYNGSQAGCSSGGISPIPPQMGVSPKYRRSISFPIKGNSPTAIYGNMHMDGMGSGHM 298
            |.|...||.:|       |||:|                            :|..|..|   |.|
Zfish   287 PWGSHQGSGWN-------SGGMS----------------------------WGRDHRRG---GGM 313

  Fly   299 NIPTLSIGNGGGGGSTGMV-------SAGATGGGDAPYLGNSYG-------NMM-TSNG------ 342
            .:|          ||...:       |:........|....|.|       ||. |.|.
Zfish   314 GVP----------GSINQISPMKKPFSSNVIAPPKFPRSAGSLGPKSWIEENMFRTDNNSNTLLP 368

  Fly   343 -----------QMHHGGGLDNSLCDYMR--NMSLGGNGGGDGSNSMSLMQDRMRVMGGPKHLSEA 394
                       .||   .|::||.|.||  ...|.|:.|.....:..|:....|..|..:..|..
Zfish   369 LQDRSRMYDSLNMH---SLESSLIDIMRAEQDPLKGHVGCPHPGADGLLMLNARSYGRRRGRSSL 430

  Fly   395 ----DAMAIAASGND--PSVYLNALKMGSPSRLSPHSPHSPIQGGNGGNVGDGTARFSRKVFVGG 453
                |.:.....||.  |.|      :||| :..||.        ||..:    .||||||||||
Zfish   431 FPIDDGLLDDGHGNQGVPGV------LGSP-QCYPHQ--------NGERI----ERFSRKVFVGG 476

  Fly   454 LPPDIDEDEITTSFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQDESSVQQLIDSCITDEDKLY 518
            |||||||||||:||||||.||||||||||||||||||||||||||:|:|||.||::|:.::.|||
Zfish   477 LPPDIDEDEITSSFRRFGHLVVDWPHKAESKSYFPPKGYAFLLFQEETSVQALIEACLEEDGKLY 541

  Fly   519 LCVSSPTIKDKAVQIRPWRLADADYVLDATMSLDPRKTVFVGGVPRPLKAFELAMIMDRLYGGVC 583
            |||||||||||.||||||.|:|:|:|:|.:..||||||:|||||||||:|.||||||||||||||
Zfish   542 LCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVC 606

  Fly   584 YAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHGDIDKRVEVKPYVLDDQMCDECEGQ 648
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||:||||:|.
Zfish   607 YAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHGDIDKRVEVKPYVLDDQLCDECQGA 671

  Fly   649 RCGGKFAPFFCANVTCLQYYCEHCWAVIHSRPGREYHKPLVKEGADRPRAVPFRW 703
            ||||||||||||||||||||||.|||.||||.|||:|||||||||||||.:.|||
Zfish   672 RCGGKFAPFFCANVTCLQYYCEFCWANIHSRAGREFHKPLVKEGADRPRQIHFRW 726

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
orb2	NP_001356977.1	RRM1_CPEB2_like	447..538	CDD:410123	77/90 (86%)
		RRM2_CPEB2_like	555..635	CDD:410125	76/79 (96%)
		CEBP_ZZ	630..691	CDD:465105	53/60 (88%)
cpeb2	XP_002666445.3	None