DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp66E and Tspan1

DIOPT Version :10

Sequence 1:NP_523985.1 Gene:Tsp66E / 39017 FlyBaseID:FBgn0035936 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_598442.1 Gene:Tspan1 / 66805 MGIID:1914055 Length:240 Species:Mus musculus


Alignment Length:247 Identity:74/247 - (29%)
Similarity:117/247 - (47%) Gaps:23/247 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 KYLLCIFNFIFFVLGTIIFGVGLWLAVDKHSLIALLKLVESERIEQFTQPQAIEQLAYVLLVIGA 75
            |.::.:||.:.|:.|..:..||:|::||..|.:.:...:.|..: ||.      .:.|.|:..||
Mouse     8 KVMMFLFNLLIFLCGAALLAVGIWVSVDGTSFLKVFGSLSSSAM-QFV------NVGYFLIAAGA 65

  Fly    76 VMFFMSFLGYLGAMRESRCLLSTYGTFLILLLIAEIVAGGLGAFFKDKVRAESKNFLQTTITSYS 140
            |:|.:.|||..||..|::|:|..:.:.|:::.|||| ||.:.|.....:..:....|........
Mouse    66 VLFILGFLGCYGAHSENKCVLMMFFSILLIIFIAEI-AGAVVALVYTTLAEQFLTLLVVPAIEKD 129

  Fly   141 LGENVDATSLMWNQLMGNFGCCGINDYHDFDASPAWVNGKGNRTIPDACCILKDVAKLVPRDEDC 205
            .|...|.|. :||..|....|||.|:|.||:|| .:|  |.|:..|..||.......:.|    |
Mouse   130 YGYQTDFTQ-VWNTTMEELHCCGFNNYTDFNAS-RFV--KENKVFPPPCCANPGNHTVEP----C 186

  Fly   206 TTNPSDSNSFYKKGCYEVFTEWL--IRQRELVIVAIAVGIVHLVLIILAFAL 255
            |  ...:.|...:||   |.|.|  ||...:.:..:|||:..|.|..:..::
Mouse   187 T--EEKAKSMKVQGC---FKEILHRIRANAVTVGGVAVGVAALELAAMVVSM 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp66ENP_523985.1 Tetraspanin 11..257 CDD:459767 74/247 (30%)
tetraspanin_LEL 120..228 CDD:351888 30/107 (28%)
Tspan1NP_598442.1 Tetraspanin 7..>151 CDD:459767 44/151 (29%)
uroplakin_I_like_LEL 106..208 CDD:239409 32/114 (28%)

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