DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp66E and prph2a

DIOPT Version :10

Sequence 1:NP_523985.1 Gene:Tsp66E / 39017 FlyBaseID:FBgn0035936 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_571641.1 Gene:prph2a / 58085 ZFINID:ZDB-GENE-000616-8 Length:345 Species:Danio rerio


Alignment Length:320 Identity:50/320 - (15%)
Similarity:101/320 - (31%) Gaps:138/320 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LLCIFNFIFFVLGTIIFGVGLWLAVDKHSLIALLKLVESERIEQFTQPQAIEQLAYVLLVIGAVM 77
            :|.:..:...:.|.::|.:||:..::......|:...||..:..            :|:.:|.: 
Zfish    19 MLWLMYWFSVMAGVLVFSMGLFFKIELRKRSELMDNNESHFVPN------------ILIGVGLL- 70

  Fly    78 FFMSFLGYLGAMRESRCLLSTYG---------------------TFLILLLI------------- 108
                           .|.|:.:|                     .|||..|:             
Zfish    71 ---------------ACCLNAFGGKVCYDSLDSSKYAKWKSIMTPFLICCLVFNFLLIVTAAMCF 120

  Fly   109 ----------AEIVAGGLGAFFKDKVRAESKNFLQTTITSYSLGENVDATSLMWNQLMGNFGCCG 163
                      ||.:..|: .::|| .....:.:::.|:                :.:...|.|||
Zfish   121 AMRIPLEFTLAEGLKNGM-KYYKD-TDTPGRCYMKRTL----------------DLMQMEFRCCG 167

  Fly   164 INDYHDF-------------------DASPAWVNGK----GNRTIPDACCILKDVAKLVPRDEDC 205
            .|:|.|:                   |...:.|:||    |   :|.:||   :.:...|..:..
Zfish   168 NNNYKDWFEIQWVSNRYLDFSAKEVKDRISSNVDGKYLMDG---VPFSCC---NPSSPRPCIQQQ 226

  Fly   206 TTNPSDSNSF---------YKKGCYEVFTEW----------LIRQRELVIVAIAVGIVHL 246
            .||.|...|:         :|:||.:....:          |:....|:..|:.:|:.::
Zfish   227 ITNNSAHYSYDHYTEDLNIWKRGCRDALVSYYGGMMNTIGVLVLLVTLLQSAVMIGLQYI 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp66ENP_523985.1 Tetraspanin 11..257 CDD:459767 50/320 (16%)
tetraspanin_LEL 120..228 CDD:351888 26/149 (17%)
prph2aNP_571641.1 Tetraspanin 16..>167 CDD:459767 25/193 (13%)
peripherin_like_LEL 120..262 CDD:239415 29/165 (18%)

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