DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp66E and tspan3a

DIOPT Version :10

Sequence 1:NP_523985.1 Gene:Tsp66E / 39017 FlyBaseID:FBgn0035936 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_001020709.1 Gene:tspan3a / 565579 ZFINID:ZDB-GENE-030131-7787 Length:253 Species:Danio rerio


Alignment Length:262 Identity:65/262 - (24%)
Similarity:115/262 - (43%) Gaps:46/262 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 CGVWCAKYLLCIFNFIFFVLGTIIFGVGLWLAV----------DKHSLIALLKLVESERIEQFTQ 59
            ||:..:|.:|...|.||:....|:..||.::.:          |.::||.               
Zfish     4 CGITSSKTVLVFLNLIFWAAAGILCYVGAYVFITYDDYDHFFEDVYTLIP--------------- 53

  Fly    60 PQAIEQLAYVLLVIGAVMFFMSFLGYLGAMRESRCLLSTYGTFLILLLIAEIVAGGLGAFFKDKV 124
                   |.|::.:||::|.:..:|....:|||||.|:|:...|:|:.:.|:|...||..::.||
Zfish    54 -------AVVIIAVGALLFIIGLIGCCATIRESRCGLATFVIILMLVFVTEVVVVVLGYIYRAKV 111

  Fly   125 RAESKNFLQTTITSYSLGENVDATSLMWNQLMGNFGCCGINDYHDFDASPAWVNGKGNRTIPDAC 189
            ..|..:.:|.....|: |.|.||.|...:.:.....||||.::.|: .:..|.....|.::|.:|
Zfish   112 EDEVNHSIQKVYNEYN-GTNTDAPSRAIDYVQRQLHCCGITNFADW-RNTRWFKESKNNSVPLSC 174

  Fly   190 CILKDVAKLVPRDEDCTTNPSDSNSFYKKGCYEVFTEWLIRQRELVIVAIAVGIVHLVLIILAFA 254
            |        .|...:||.:.......|.:||.|:..:.|   :|:::..|...:....:.:|.. 
Zfish   175 C--------KPNVSNCTGSLLHPGDLYPEGCEELVVKKL---KEIMMYVIWAALTFAAIQMLGM- 227

  Fly   255 LC 256
            ||
Zfish   228 LC 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp66ENP_523985.1 Tetraspanin 11..257 CDD:459767 63/256 (25%)
tetraspanin_LEL 120..228 CDD:351888 27/107 (25%)
tspan3aNP_001020709.1 Tetraspanin 9..235 CDD:459767 63/257 (25%)
TM4SF8_like_LEL 104..210 CDD:239416 30/118 (25%)

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