DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp66E and tspan4b

DIOPT Version :10

Sequence 1:NP_523985.1 Gene:Tsp66E / 39017 FlyBaseID:FBgn0035936 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_001076276.1 Gene:tspan4b / 556934 ZFINID:ZDB-GENE-070410-127 Length:232 Species:Danio rerio


Alignment Length:262 Identity:72/262 - (27%)
Similarity:126/262 - (48%) Gaps:45/262 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 CAKYLLCIFNFIFFVLGTIIFGVGLWLAVDKHSLIALLKLVESERIEQFTQPQAIEQL--AYVLL 71
            |.|||:.:||.||::.|..:||||:|||..:....:|              |.:...|  |.:||
Zfish    10 CVKYLMFVFNLIFWLGGCGLFGVGVWLAFTQSEFSSL--------------PLSFPSLSAANLLL 60

  Fly    72 VIGAVMFFMSFLGYLGAMRESRCLLSTYGTFLILLLIAEIVAGGLGAFFKDKVRAESKNFLQTTI 136
            |.|.|.....|||.|||::|.:|||.|:...|::|::.|:|...:.:.:.:::..::|:.|:..:
Zfish    61 VAGGVTMVTGFLGCLGALKEQKCLLLTFFVILLILVLTEVVLILVLSLYHEELDKKAKDDLREGM 125

  Fly   137 TSYSLGENVDATSLMWNQLMGNFGCCGINDYHDFDASPAWVNGKGNRTIPDACCILKDVAKLVPR 201
            ..||..   |.....|:.:...|.|||::::.|      |.|...:..:|.:||           
Zfish   126 KGYSKN---DGLRKSWDNMQMIFKCCGVSNHTD------WHNKTTDGKLPGSCC----------- 170

  Fly   202 DEDCTTNPSDSNSFYKKGCYEVFTEWLIRQRELVI-VAIAVGIVHLVLIILAFAL-CKAF--AKY 262
                 :|...|...:::.|||...:||:.....|: ..:.:|||.|:.::.:..: |:..  .||
Zfish   171 -----SNDPSSCRHWEEPCYEKAKQWLLTNITSVLGFGVCIGIVQLLALVFSMLMYCQILRAEKY 230

  Fly   263 ND 264
            .|
Zfish   231 MD 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp66ENP_523985.1 Tetraspanin 11..257 CDD:459767 67/249 (27%)
tetraspanin_LEL 120..228 CDD:351888 21/107 (20%)
tspan4bNP_001076276.1 Tetraspanin 11..222 CDD:459767 67/249 (27%)
NET-5_like_LEL 108..196 CDD:239418 23/112 (21%)

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