DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp66E and tspan5b

DIOPT Version :10

Sequence 1:NP_523985.1 Gene:Tsp66E / 39017 FlyBaseID:FBgn0035936 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_001008591.1 Gene:tspan5b / 494048 ZFINID:ZDB-GENE-041212-12 Length:271 Species:Danio rerio


Alignment Length:271 Identity:79/271 - (29%)
Similarity:118/271 - (43%) Gaps:51/271 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 CAKYLLCIFNFIFFVLGTIIFGVGLWLAVDKHSLIALLKLVESERIEQFTQPQAIEQLAYVLLVI 73
            |.||.:..||.||::||.....|.||...:|..|         ..|...|.....:.: ::.||:
Zfish    14 CIKYFIFGFNIIFWLLGVAFLSVALWAWSEKGVL---------SNISSITDLGGFDPV-WLFLVV 68

  Fly    74 GAVMFFMSFLGYLGAMRESRCLLSTYGTFLILLLIAEIVAGGLGAFFKDKVRAESKNFLQTTITS 138
            |.|||.:.|.|.:||:||:..||..:..||.::...|:.||.|...|||.::.:.|.|:...|.:
Zfish    69 GGVMFVLGFAGCIGALRENSFLLKFFSVFLGIIFFLELTAGVLAFVFKDWIKDQLKFFINNNIRA 133

  Fly   139 Y----SLGENVDATSLMWNQLMGNFGCCGINDYHDFDASPAWVNGKGNRT----------IPDAC 189
            |    .|...:|.|...|.       |||.....|::     :|...|.|          :|.:|
Zfish   134 YRDDIDLQNLIDFTQDYWE-------CCGAFGPEDWN-----LNIYFNCTDTNLSREKCGVPFSC 186

  Fly   190 CILKDVAKLVPRDEDC-----TTNPSDSNSF-YKKGCYEVFTEWLIRQRELVIVA-IAVGIVHLV 247
            | .||.|:.|...: |     .....:..:| :.|||...|.:||  |..|.:|| |.:||.   
Zfish   187 C-TKDPAEDVINTQ-CGYDIRGKGDIEHKTFIHTKGCVPQFEKWL--QENLTVVAGIFIGIA--- 244

  Fly   248 LIILAFALCKA 258
             ::..|.:|.|
Zfish   245 -LLQIFGICLA 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp66ENP_523985.1 Tetraspanin 11..257 CDD:459767 76/266 (29%)
tetraspanin_LEL 120..228 CDD:351888 31/127 (24%)
tspan5bNP_001008591.1 Tetraspanin 15..258 CDD:459767 78/270 (29%)
TM4SF9_like_LEL 113..233 CDD:239412 34/135 (25%)

Return to query results.
Submit another query.