DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp66E and tspan18b

DIOPT Version :10

Sequence 1:NP_523985.1 Gene:Tsp66E / 39017 FlyBaseID:FBgn0035936 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_001002439.2 Gene:tspan18b / 436712 ZFINID:ZDB-GENE-040718-137 Length:258 Species:Danio rerio


Alignment Length:269 Identity:77/269 - (28%)
Similarity:132/269 - (49%) Gaps:48/269 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DCGVWCAKYLLCIFNFIFFVLGTIIFGVGLWLAVDK---HSLIALLKLVESERIEQFTQPQAIEQ 65
            || :.|.|||:.:|||:.|:.|:.:.|||:|:.||.   ..::|...|:       ||.      
Zfish    16 DC-LSCIKYLMFVFNFLIFLGGSFLLGVGVWVVVDPTGFREIVAANPLL-------FTG------ 66

  Fly    66 LAYVLLVIGAVMFFMSFLGYLGAMRESRCLLSTYGTFLILLLIAEIVAGGLGAFFKDKVRAESKN 130
             .|::|.:|.::|.:.|||..||:||::|||..:...::::.:||:.|..|...|::.:..|  .
Zfish    67 -VYIILAMGGMLFLLGFLGCCGAIRENKCLLLFFFMLILIIFLAELAAAILAFIFREHLTRE--Y 128

  Fly   131 FLQTTITSYSLGENVDATSLMWNQLMGNFGCCGINDYHDFDAS------PAWVNGKGNRTIPDAC 189
            |.:.....|....|.|..:..||.:|..|.|||:|...||:.|      |       :..:|:||
Zfish   129 FTKELKKHYQGYNNTDVFTSTWNAIMNTFDCCGVNSPEDFEESIFRIINP-------SEMVPEAC 186

  Fly   190 CILKD-VAKL-VPRDEDCTTNPSDSNSFYK--KGCYEVFTEWLIRQRELVIV---AIAVGIVHLV 247
            |...: |.:. ....|:|.:    .:..|:  ||||....::.    |:.|.   |:|:.::.:.
Zfish   187 CRRNNHVGESGFSNREECLS----GSMLYRNNKGCYSAVVDYF----EMYIYVAGALAIVVLTIE 243

  Fly   248 LIILAFALC 256
            |..:.||:|
Zfish   244 LFAMVFAMC 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp66ENP_523985.1 Tetraspanin 11..257 CDD:459767 74/262 (28%)
tetraspanin_LEL 120..228 CDD:351888 30/117 (26%)
tspan18bNP_001002439.2 Tetraspanin 21..255 CDD:459767 74/263 (28%)
uroplakin_I_like_LEL 118..229 CDD:239409 31/127 (24%)

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