DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp66E and tspan9b

DIOPT Version :10

Sequence 1:NP_523985.1 Gene:Tsp66E / 39017 FlyBaseID:FBgn0035936 Length:267 Species:Drosophila melanogaster
Sequence 2:XP_068075684.1 Gene:tspan9b / 431733 ZFINID:ZDB-GENE-040704-25 Length:337 Species:Danio rerio


Alignment Length:261 Identity:72/261 - (27%)
Similarity:129/261 - (49%) Gaps:36/261 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 CAKYLLCIFNFIFFVLGTIIFGVGLWLAVDKHSLIALLKLVESERIEQFTQPQAIEQLAYVLLVI 73
            |.||::.:||.:|::.|..:.|||:||:|.:.|...            |:........|.:::.:
Zfish   106 CVKYMMFLFNLLFWLSGCGLLGVGIWLSVSQGSFAT------------FSPSFPSLSAANLVITL 158

  Fly    74 GAVMFFMSFLGYLGAMRESRCLLSTYGTFLILLLIAEIVAGGLGAFFKDKVRAESKNFLQTTITS 138
            |:|:....|||.|||::|::|||.::...|:::|:||::...|...:.:||...:|..|:..:..
Zfish   159 GSVVMVTGFLGCLGAIKENKCLLLSFFIVLLIILLAELILLILFFVYTEKVSENAKQDLKDGLRL 223

  Fly   139 YSLGENVDATSLMWNQLMGNFGCCGINDYHDFDASPAWVNGKGNRTIPDACCILKDVAKLVPRDE 203
            |:...||...: .||.:...:.|||:....|      |......:::||.||        .....
Zfish   224 YNTDNNVGLRN-AWNIIQAEWQCCGVTGLSD------WHEALQEKSVPDRCC--------QEHYT 273

  Fly   204 DCTTNPSDSNSFYKKGCYEVFTEWLIRQRELVIVAIAVGIVHLVLIILAFALC------KAFAKY 262
            :|..|  .:|.|:.:||||...|||...:.| :..||:.::.|.|:.:||::.      :|..||
Zfish   274 ECGRN--TTNVFWSQGCYEKVEEWLNDNKHL-LGTIAMCVLVLQLLGMAFSMTLYQQIHRAGKKY 335

  Fly   263 N 263
            :
Zfish   336 D 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp66ENP_523985.1 Tetraspanin 11..257 CDD:459767 68/251 (27%)
tetraspanin_LEL 120..228 CDD:351888 27/107 (25%)
tspan9bXP_068075684.1 Tetraspanin 107..326 CDD:459767 68/248 (27%)
NET-5_like_LEL 203..300 CDD:239418 29/113 (26%)

Return to query results.
Submit another query.