DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp66E and TM4SF

DIOPT Version :10

Sequence 1:NP_523985.1 Gene:Tsp66E / 39017 FlyBaseID:FBgn0035936 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_001261159.1 Gene:TM4SF / 37786 FlyBaseID:FBgn0020372 Length:292 Species:Drosophila melanogaster


Alignment Length:269 Identity:58/269 - (21%)
Similarity:110/269 - (40%) Gaps:78/269 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 CAKYLLCIFNFIFFV---------LGT-IIFGVGLWLAVDKHSLIALLKLVESERIEQFTQPQAI 63
            |.|||  :::::..:         ||| :::|..::..:.::.|.|               |.||
  Fly     9 CFKYL--VYSYVVLLALTGAAQIFLGTSLLWGHSVYYGIVQNKLWA---------------PAAI 56

  Fly    64 EQLAYVLLVIGAVMFFMSFLGYLGAMRESRCLLSTYGTFLILLLIAEIVAGGLGAFFKDKVRAES 128
                  ||.:|.|.|.:.::|.....:..||||..:...|:..:..:.:..|.....::.:....
  Fly    57 ------LLCLGPVTFILCWMGCQATNQRKRCLLGMFAALLVACICVQFIICGWSLAMRENLPTSV 115

  Fly   129 KNFLQTTITSYSLGENVDATSL----MWNQLMGNFGCCGIN---DYHDFDASPAWVNGKGNRTIP 186
            :.|:..:...:.  :....|.:    :||::.....|||::   ||.             ..::|
  Fly   116 EIFIDDSFVEFL--DKFSRTKVDNLHLWNRMQSQLQCCGVDGPLDYR-------------RLSLP 165

  Fly   187 DACCILKDVAKLVPRDEDCTTNPSDSNSFYKKGCYEVFTEWLIRQRELV------IVAI--AVGI 243
            .:||         .|.|....:..|::  ||:||..|.:| .||.|.|:      |:||  ::||
  Fly   166 WSCC---------SRPEHAYESACDTH--YKRGCLAVVSE-QIRNRLLITAFGAAIIAIFQSLGI 218

  Fly   244 ---VHLVLI 249
               |||.::
  Fly   219 FCAVHLTIL 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp66ENP_523985.1 Tetraspanin 11..257 CDD:459767 57/267 (21%)
tetraspanin_LEL 120..228 CDD:351888 21/114 (18%)
TM4SFNP_001261159.1 Tetraspanin 10..224 CDD:459767 55/263 (21%)

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