DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp66E and Tspan13

DIOPT Version :10

Sequence 1:NP_523985.1 Gene:Tsp66E / 39017 FlyBaseID:FBgn0035936 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_001013262.1 Gene:Tspan13 / 366602 RGDID:1311788 Length:204 Species:Rattus norvegicus


Alignment Length:198 Identity:47/198 - (23%)
Similarity:85/198 - (42%) Gaps:34/198 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 CGVW-CAKYLLCIFNFIFFVLGTIIFGVGLWLAVDKHSLIALLKLVESERIEQFTQPQAIEQLAY 68
            ||.: |:|..||..|.::.::..::.|:..|..  ...||:.|::|.                  
  Rat     3 CGGFSCSKNCLCALNLLYTLVSLLLIGIAAWGI--GFGLISSLRVVG------------------ 47

  Fly    69 VLLVIGAVMFFMSFLGYLGAMRESRCLLSTYGTFLILLLIAEIVAGGLGAFFKDKVRAESKNFLQ 133
            |::.:|..:|.::.:|.:||::..:.||..|   :|:||:..||...:........|.:....|:
  Rat    48 VVIAVGIFLFLIALVGLIGAVKHHQVLLFFY---MIILLLVFIVQFSVSCACLALNREQQGQLLE 109

  Fly   134 TTITSYSLGENVDATSLMWNQLMGNFGCCGINDYHDFDASPAWVNGKGNRTIPDACCILKDVAKL 198
                   :|.|..|::.  |.:..|..|||..:|:..|..||.. .|.|:.......|:.:.|..
  Rat   110 -------VGWNNTASAR--NDIQRNLNCCGFRNYNPNDTCPASC-AKSNQKCSSCAPIIGEYAGE 164

  Fly   199 VPR 201
            |.|
  Rat   165 VLR 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp66ENP_523985.1 Tetraspanin 11..257 CDD:459767 44/191 (23%)
tetraspanin_LEL 120..228 CDD:351888 20/82 (24%)
Tspan13NP_001013262.1 Tetraspanin <55..190 CDD:459767 32/126 (25%)

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