DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp66E and Tsp42Ee

DIOPT Version :10

Sequence 1:NP_523985.1 Gene:Tsp66E / 39017 FlyBaseID:FBgn0035936 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_523631.1 Gene:Tsp42Ee / 35614 FlyBaseID:FBgn0029506 Length:228 Species:Drosophila melanogaster


Alignment Length:278 Identity:79/278 - (28%)
Similarity:122/278 - (43%) Gaps:74/278 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DCGVWCAKYLLCIFNFIFFVLGT--IIFGVGLWLAVDKHSLIALLKLVESERIE-QFTQP-QAIE 64
            |||....||:|.|||.|..|:|.  |::||            .:||.:....:. |...| ||: 
  Fly     2 DCGTSMVKYILFIFNTIVSVIGILGIVYGV------------LILKSIGVVEVNGQVGFPIQAL- 53

  Fly    65 QLAYVLLVIGAVMFFMSFLGYLGAMRESRCLLSTYGTFLILLLIAEIVAGGLGAFFKDKVRAESK 129
             :..:|:.:|:::.|:||||..||:|||.|:..:|.|||::|||.::....|  .|..  |.|.:
  Fly    54 -MPIILISLGSIVVFISFLGCCGAIRESVCMTMSYATFLLILLILQLTFVVL--LFTH--REEFE 113

  Fly   130 NFLQTTITSYSLGENVDATSLMWNQ-----------LMGNFGCCGINDYHDFDASPAWVNGKGNR 183
            |.:...|      ||.      ||.           :..:..|||.:...|:       .|||: 
  Fly   114 NAMGNVI------ENA------WNSEHTYKGGVFDTIQKSLHCCGSSSALDY-------IGKGD- 158

  Fly   184 TIPDACCILKDVAKLVPRDEDCTTNPSDSNSFYKKGCYEVFTEWLIRQRELVIVAIAVGIVHLVL 248
            .:|.:||   ..:.|:|      ||       |..||...|.|.:....:.. ..:.:|::.:.|
  Fly   159 LVPPSCC---SGSCLIP------TN-------YYPGCRGKFVELMTTGSDNA-KYVGIGLIGIEL 206

  Fly   249 IILAFALCKAFAKYNDMR 266
            |...||.|.|    |::|
  Fly   207 IGFIFACCLA----NNVR 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp66ENP_523985.1 Tetraspanin 11..257 CDD:459767 72/260 (28%)
tetraspanin_LEL 120..228 CDD:351888 28/118 (24%)
Tsp42EeNP_523631.1 Tetraspanin 8..217 CDD:459767 74/267 (28%)

Return to query results.
Submit another query.