DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp66E and Tsp42Ec

DIOPT Version :10

Sequence 1:NP_523985.1 Gene:Tsp66E / 39017 FlyBaseID:FBgn0035936 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_523629.1 Gene:Tsp42Ec / 35612 FlyBaseID:FBgn0033124 Length:232 Species:Drosophila melanogaster


Alignment Length:267 Identity:65/267 - (24%)
Similarity:104/267 - (38%) Gaps:67/267 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 IFNFIFFVLGTIIFGVGLWLAVDKHSLIALLKLVESERIE---QFTQPQAIEQLAYVLLVIGAVM 77
            |.|||.:::..:...||:.|.|     :..:.|.:..|.:   ..|.|..|   ...:.|:|.::
  Fly     7 IVNFILYIVNIVFLIVGILLIV-----LGSIMLSDLSRFDVAGSGTDPNTI---PICVTVLGGLI 63

  Fly    78 FFMSFLGYLGAMRESRCLLSTYGTFLILLLIAEIVAGGLGAFFKDKVRAESKNFLQTTIT----- 137
            |.:||.|..|..|:|.|:...|.:.:.:|.|                       ||..:|     
  Fly    64 FVVSFFGCYGIFRQSVCMTGAYTSMVFVLFI-----------------------LQLVLTCWVFV 105

  Fly   138 --SYSLGENVDATSLMWNQ----LMG----NFGCCGINDYHDFDASPAWVNGKGNRTIPDACCIL 192
              |..||:..:..:|:|:.    .||    .|||||...|.::       |..| .::|..||..
  Fly   106 NRSAFLGDMSNLVNLLWDSHDYTAMGVLEETFGCCGDTSYTNY-------NNIG-LSVPGTCCGY 162

  Fly   193 KDVAKLVPRDEDCTTNPSDSNSFYKKGCYEVFTEWLIRQRELV-IVAIAVGIVHLVLIILAFALC 256
            .|      |...|.| ||...|  :.||...|.|:.....::: ...:.:.|..||:.::|.||.
  Fly   163 LD------RQATCNT-PSVYQS--RPGCSAKFEEFWNDNMDIIRWSGLGLCIFDLVVFLIAGALT 218

  Fly   257 KAFAKYN 263
            ......|
  Fly   219 NCMRSQN 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp66ENP_523985.1 Tetraspanin 11..257 CDD:459767 64/259 (25%)
tetraspanin_LEL 120..228 CDD:351888 32/122 (26%)
Tsp42EcNP_523629.1 Tetraspanin 8..219 CDD:459767 63/258 (24%)
tetraspanin_LEL <137..192 CDD:351888 22/71 (31%)

Return to query results.
Submit another query.