DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp66E and Tspan9

DIOPT Version :10

Sequence 1:NP_523985.1 Gene:Tsp66E / 39017 FlyBaseID:FBgn0035936 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_001101360.1 Gene:Tspan9 / 312728 RGDID:1304740 Length:330 Species:Rattus norvegicus


Alignment Length:246 Identity:71/246 - (28%)
Similarity:116/246 - (47%) Gaps:32/246 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 CAKYLLCIFNFIFFVLGTIIFGVGLWLAVDKHSLIALLKLVESERIEQFTQPQAIEQLAYVLLVI 73
            |.||::.:||.||::.|..:.|||:||:|.:.:...            |:........|.:::.|
  Rat    99 CLKYMMFLFNLIFWLCGCGLLGVGIWLSVSQGNFAT------------FSPSFPSLSAANLVIAI 151

  Fly    74 GAVMFFMSFLGYLGAMRESRCLLSTYGTFLILLLIAEIVAGGLGAFFKDKVRAESKNFLQTTITS 138
            |.::....|||.|||::|::|||.::...|:::|:||::...|...:.|||...:|..|:..:..
  Rat   152 GTIVMVTGFLGCLGAIKENKCLLLSFFIVLLIILLAELILLILFFVYMDKVNENAKQDLKEGLLL 216

  Fly   139 YSLGENVDATSLMWNQLMGNFGCCGINDYHDFDASPAWVNGKGNRTIPDACCILKDVAKLVPRDE 203
            |:...||...: .||.:.....|||:.||.|      |....|..|:||.||        :...:
  Rat   217 YNTENNVGLKN-AWNIIQAEMRCCGVTDYTD------WYPVLGENTVPDRCC--------MENSQ 266

  Fly   204 DCTTNPSDSNSFYKKGCYEVFTEWLIRQRELVIVAIAVGIVHLVLIILAFA 254
            .|..|  .:...:|.||||....|....:.   |...||:..|::.||..|
  Rat   267 GCGRN--STTPLWKTGCYEKVKLWFDDNKH---VLGTVGMCFLIMQILGMA 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp66ENP_523985.1 Tetraspanin 11..257 CDD:459767 70/244 (29%)
tetraspanin_LEL 120..228 CDD:351888 30/107 (28%)
Tspan9NP_001101360.1 Tetraspanin 100..319 CDD:459767 70/245 (29%)
NET-5_like_LEL 196..293 CDD:239418 31/113 (27%)

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