DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp66E and Cd63

DIOPT Version :10

Sequence 1:NP_523985.1 Gene:Tsp66E / 39017 FlyBaseID:FBgn0035936 Length:267 Species:Drosophila melanogaster
Sequence 2:XP_063119178.1 Gene:Cd63 / 29186 RGDID:62080 Length:304 Species:Rattus norvegicus


Alignment Length:245 Identity:69/245 - (28%)
Similarity:118/245 - (48%) Gaps:34/245 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVFDCGVWCAKYLLCIFNFIF--FVLGTIIFGVGLWLAVDKHSLIALLKLVESERIEQFTQPQAI 63
            |..:.|:.|.|:||.:....|  ..:|.|..||.             :::|..:.|...|...::
  Rat    25 MAVEGGMKCVKFLLYVLLLAFCACAVGLIAIGVA-------------VQVVLKQAITHETTAGSL 76

  Fly    64 EQLAYVLLVIGAVMFFMSFLGYLGAMRESRCLLSTYGTFLILLLIAEIVAGGLGAFFKDKVRAES 128
              |..|::.:||.:|.::|:|..||.:|:.||:.|:..||.|:::.|:.....|..|:|:|::|.
  Rat    77 --LPVVIIAVGAFLFLVAFVGCCGACKENYCLMITFAIFLSLIMLVEVAVAIAGYVFRDQVKSEF 139

  Fly   129 KNFLQTTITSYSLGENVDATSLMWNQLMGNFGCCGINDYHDFDASPAWVNGKGNRTIPDACCILK 193
            ....|..:.:| |.:|..||.|  ::|.....|||.::|.|::..|    |.....:||:|||..
  Rat   140 SKSFQKQMQNY-LTDNKTATIL--DKLQKENKCCGASNYTDWERIP----GMAKDRVPDSCCINI 197

  Fly   194 DVAKLVPRDEDCTTNPSDSNSFYKKGCYEVFTEWLIRQRELVIVAIAVGI 243
            .|.        | .|....::.:.:||.|....|| |:..|::...|:||
  Rat   198 TVG--------C-GNDFKESTIHTQGCVETIAAWL-RKNVLLVAGAALGI 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp66ENP_523985.1 Tetraspanin 11..257 CDD:459767 66/235 (28%)
tetraspanin_LEL 120..228 CDD:351888 30/107 (28%)
Cd63XP_063119178.1 None

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