DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp66E and Cd37

DIOPT Version :10

Sequence 1:NP_523985.1 Gene:Tsp66E / 39017 FlyBaseID:FBgn0035936 Length:267 Species:Drosophila melanogaster
Sequence 2:XP_017444339.1 Gene:Cd37 / 29185 RGDID:62035 Length:396 Species:Rattus norvegicus


Alignment Length:266 Identity:73/266 - (27%)
Similarity:118/266 - (44%) Gaps:34/266 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 KYLLCIFNFIFFVLGTIIFGVGLWLAVDKHSLIALLKLVESERIEQFTQPQAIEQLAYVLLVIGA 75
            ||.|.:||..|||||.:||..|.|:.:||.|.::.:.|       .|.   .::..:.||.|.|.
  Rat    35 KYFLFVFNLFFFVLGGLIFCFGTWILIDKTSFVSFVGL-------SFV---PLQTWSKVLSVSGV 89

  Fly    76 VMFFMSFLGYLGAMRESRCLLSTYGTFLILLLIAEIVAGGLGAFFKDKVRAESKNFLQTTITSYS 140
            :...::.||.:||::|.||||..|...|:||...:|..|.|.:..:.::....:..:..||.||.
  Rat    90 LTMALALLGCVGALKELRCLLGLYFGMLLLLFATQITLGILISTQRVRLERRVQELVLRTIQSYR 154

  Fly   141 LGENVDATSLMWNQLMGNFGCCGINDYHDFD-ASPAWVNGKGNRTIPDAC--------------C 190
            ...:..|....|:.......|||.....|:: |.....||.....:|.:|              .
  Rat   155 TNPDETAAEESWDYAQFQLRCCGWQSPRDWNKAQMLKANGSEELFVPCSCYNSTATNDSSGFDKL 219

  Fly   191 ILKDVAKLVPRDE-----DCTTNPSDSNSFYKKGCYEVFTEWLIRQRELVIVAIAVGIVHLVLII 250
            .|..:::|.||.:     |....|:.:: .|::||.....:|| ....:.||.|.:|:.  :|.:
  Rat   220 FLSQLSRLGPRAKLRQTADICALPAKAH-IYREGCARSLQKWL-HNNIISIVGICLGVG--LLEV 280

  Fly   251 LAFALC 256
            ...|||
  Rat   281 SGMALC 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp66ENP_523985.1 Tetraspanin 11..257 CDD:459767 73/266 (27%)
tetraspanin_LEL 120..228 CDD:351888 24/127 (19%)
Cd37XP_017444339.1 Tetraspanin 49..>177 CDD:459767 37/137 (27%)
CD37_CD82_like_LEL 131..266 CDD:239413 26/136 (19%)

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