DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp66E and cd53

DIOPT Version :10

Sequence 1:NP_523985.1 Gene:Tsp66E / 39017 FlyBaseID:FBgn0035936 Length:267 Species:Drosophila melanogaster
Sequence 2:XP_002942834.1 Gene:cd53 / 100496085 XenbaseID:XB-GENE-868554 Length:228 Species:Xenopus tropicalis


Alignment Length:253 Identity:68/253 - (26%)
Similarity:121/253 - (47%) Gaps:57/253 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 KYLLCIFNFIFFVLGTIIFGVGLWLAVDKHSLIALLKLVESERIEQFTQPQAIEQLAYVLLVIGA 75
            |||:..|||:|:|.|..|..:|::..|:.         :..:.:   |...:: .:...|:.||.
 Frog    10 KYLMFAFNFLFWVTGCSIIAIGIYFVVNN---------IYGDLL---TNNPSL-TVGNALIAIGI 61

  Fly    76 VMFFMSFLGYLGAMRESRCLLSTYGTFLILLLIAEIVAGGLGAFFKDKVRAESKNFLQTTITSYS 140
            ::....|||.:||::|::|||.|:...|:|:|:||::...| .|..:|   :..|:::..:|| |
 Frog    62 IIMVFGFLGCMGAIKENKCLLLTFFILLLLILLAEVIMAIL-LFVYEK---QLDNYVRDRLTS-S 121

  Fly   141 LGENV-DATSLMWNQLMGNFGCCGINDYHDFDASPAWVNGKGNRTIPDACCILKDVAKLVPRDED 204
            ..:|: ..:|..||.:..|..|||||...|      |   |.|  ||::||              
 Frog   122 FEQNLKQNSSETWNIIQRNLQCCGINGTKD------W---KDN--IPNSCC-------------- 161

  Fly   205 CTTNPSDSNS------FYKKGCYEVFTEWLIRQRELVIVAIAVGIVHLVLII-LAFAL 255
                .|::||      .:|.||.|....|.  ::..:.|.:....:.::.:: ::|||
 Frog   162 ----ASNANSKCSQADLFKMGCSEALKNWF--EKNFLYVGVGTICISVIEVLGMSFAL 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp66ENP_523985.1 Tetraspanin 11..257 CDD:459767 68/253 (27%)
tetraspanin_LEL 120..228 CDD:351888 30/114 (26%)
cd53XP_002942834.1 Tetraspanin 9..217 CDD:459767 68/253 (27%)
tetraspanin_LEL 104..195 CDD:351888 32/125 (26%)

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