DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mfr and dysf

DIOPT Version :10

Sequence 1:NP_001137919.1 Gene:mfr / 39016 FlyBaseID:FBgn0266757 Length:1647 Species:Drosophila melanogaster
Sequence 2:XP_031751122.1 Gene:dysf / 100488564 XenbaseID:XB-GENE-6076450 Length:2108 Species:Xenopus tropicalis


Alignment Length:2021 Identity:471/2021 - (23%)
Similarity:781/2021 - (38%) Gaps:515/2021 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 PQEFLICITVHKAAQVGVTTGELYVRISLDKMTKSTKSFPNTENPFFNEYFVFEFHCTLTELLRL 76
            ||:|.:.:.|.:..|:.....:..|::::...||.|: .....||:|:|.|.|.|..:.:||...
 Frog   214 PQDFQVRVRVIEGRQIPGINIKPVVKVTVAGQTKRTR-IRKGNNPYFDETFFFNFFESPSELFDE 277

  Fly    77 TILFELKKHMTYKKNVVVGELLVDLHSVWNQSNHGYFKKWGRLEAPIGENQTLENAVAPHGYLQL 141
            .:...:....:.:.:.|:||..:|:..::.:|.|.:.:||..|..|.      :.:....|||::
 Frog   278 PVFLTVLDSRSLRTDSVIGEFRMDVGMIYGESKHAFLRKWLLLSDPD------DFSAGAKGYLKV 336

  Fly   142 DLAIVSQHSPVSYALGSEEQDTQNLNKWTVDHDFDDIEKNLLTNVNIFAPSNIRYFVAFYR---- 202
            .|          |.||  ..|...:.|..|..|.:|||.|||....: :.......:..||    
 Frog   337 SL----------YVLG--PGDESPVEKKEVSEDKEDIEGNLLRPAGV-SLRGAHLTLKIYRAEDL 388

  Fly   203 ---------------GYFIKQSNYM---IQVSFAGFNGKTPVVKNTTTPVWNYEINFAWMYPSVA 249
                           |:...:.|.:   ::|||||....:.:::....|.|:..|.....:||:.
 Frog   389 PQMDDAVLDNVKQIFGFDSNKKNLVDPFVEVSFAGKMLLSKIMEKNANPQWSQSITLPIRFPSMC 453

  Fly   250 QRFLILIFAHEHLQW------KCVAEFELCLEEIA-------------------FNGT----PSL 285
            ::..|.:     |.|      ..:....|.:.:|:                   |:.|    |:.
 Frog   454 EKMRIRL-----LDWDRLTHNDIIGTTYLSMSKISAPGGEIEDETPRKALPVSNFDDTLGFLPTF 513

  Fly   286 GPTYLHLY----------DPVNPM--------IYVGRLLMELRSEMLTDSQPTHTLSSKTVPGLD 332
            ||.|::||          ||...:        .|.||:|:||.::::..::.    ..:.:|..|
 Frog   514 GPCYVNLYGSPREFTGFPDPYEDLNLGKGEGVAYRGRVLLELETKLVEQAEQ----KVEDIPSDD 574

  Fly   333 ETR---------------FWH-------DDVYLIEFLPLMGHH---------ILTSGTAY----- 361
            .:|               |:.       ||.  |:|...:|::         .|.|.|.|     
 Frog   575 ISRVEKYLRRRKYCLFAAFYSATMLQDVDDA--IQFEVSIGNYGNKFDNTCLPLASTTQYSRAVF 637

  Fly   362 -------------KISARLAEH---------TSNVLE---GQLRTPLDRFKSAMNSKN------- 394
                         |....|:.|         |.|:|:   ..|...||....|:.:|:       
 Frog   638 DGCQYYYLPWGNVKPVVVLSSHWEDIGHRTDTQNILQYAIDNLAANLDWVHLAVKAKSSPYDLDA 702

  Fly   395 -----------------------------------FRREAPFQSCMFRVRL-------PDNRAKY 417
                                               ||:....|.....::|       .:|..:.
 Frog   703 LVARLFDDIITDCSHALPDVKSMQGTTHLDQYLYRFRKTNLAQIVQAALKLKHDDCVEQENVMEQ 767

  Fly   418 ESDFFML-------------DIVNYM---RSELDTFK------LFQR------------------ 442
            ..|:.|.             |||.:|   ...:..::      ||.|                  
 Frog   768 AEDWLMRLKAMAEEPQNSLPDIVIWMLQGEKRVAYYRMPARDVLFSRNGSKCCGKNCGKLQTIFL 832

  Fly   443 KYPLQDDEQAKCLKVIVNNILTRIKEGL--DAHRFDHDVQPQRT----------------TWDIN 489
            |:|.:..:.||    :...:..::..||  |...|:|..|.:.:                .|...
 Frog   833 KFPQEGTQGAK----MPAQVRVQLWFGLAVDQKEFNHYAQGKLSVFAEAYENQTKLALVGNWGTT 893

  Fly   490 RQLY--LLDYFAKLPLELQNLKQKL-----------------------RSCFLE----------- 518
            ...|  ..|...|:.|..::.|...                       ...|:|           
 Frog   894 GLTYPKYSDVTGKIKLPKESFKASTGWSWAGDWFISPEKTLLYDTDAGHMSFVEEVFENQARLPG 958

  Fly   519 ----HLDTSIGDVVNELQRLVAEIGSLSSMARTQDEW-PELVLSLSASGKDVGVC---------- 568
                |:..:..||..|......||..........||| .:...::...|.:.|:.          
 Frog   959 GQWIHMTEAYSDVNGEKVLPKDEIECPPGWKWEDDEWSTDTNRAVDEQGWEYGITIPPDRKPKSW 1023

  Fly   569 --------RLNAKLFLNLRNQDADQ----------DQETLCWRL-------------KSFSFKSA 602
                    ....:.::.||.:|..|          :.|:..|..             |:.||:..
 Frog  1024 VPAEKMYHTNRRRRWVRLRRRDPKQIEILKKHKPDESESEGWEYASLFGWKFHLKYRKTDSFRRR 1088

  Fly   603 GCSHTCPNCGCTTA----IVSGCLSIVVERERKRFLAVVNKEWANIEPMLWQLN----------P 653
            ...........|.|    .:.|.|..:.:.:        :.:..|...|.:.:|          .
 Frog  1089 RWRRRMEPLERTGAAAVFALEGSLGGITDDK--------SDDGKNTSTMSFGVNRPTISCIFDYG 1145

  Fly   654 EQTHFLCHVYIHQAKVRPGGEKKNICDSHLRVLFADQACETYTSPGTLSPIWNAVITFNWVSLPG 718
            .:.|..|  ||:||:.....::.:..|.:..|.|..|:.:|.....||:|.|:..:.|:.:.:.|
 Frog  1146 NRYHLRC--YIYQARNLVPMDQDSFSDPYAIVSFLHQSQKTLVMKSTLNPTWDQTLIFHEIEVFG 1208

  Fly   719 GIGLYLKNPPLLSLEFYNSERSLPEDLVGMGSVAMSVISEDRASDSNWEDAGVFGCSKNPLRKLQ 783
            ......::||.:.:|.|:.:....::.:|.   .:...|.:|:...:|... :.| :|| :.:|.
 Frog  1209 DPETIKESPPNIVVEIYDHDTYGADEYMGR---CICKPSFERSPRLSWHPV-IMG-TKN-VGELL 1267

  Fly   784 RLKYLTP---PPLKWVPIARKGTLQAE---VLMSAEIIQISMESLTTGQNDK----KEPQLATG- 837
            ....|.|   |.:..:|     .|:.|   ||....|.:...|.|....:|.    ..||.... 
 Frog  1268 AAFELIPREKPAVHLIP-----GLEGEISGVLSELLIPRFFTEKLLDWSSDADLPYPPPQREANV 1327

  Fly   838 --IPMAIRPTMQNFVLEVFFVGLRNYSKSSMSSAGKRKINLMMGDLVLSSGPSTARIRNSINFLV 900
              :|..|:|.:|...:|:...||||.....::|.....:.:..||.::.|| ....::.:.||.|
 Frog  1328 YMVPQGIKPVLQRTAIEILAWGLRNLKSYQLASVTSPSLIVECGDELIQSG-VIKNVKKNPNFDV 1391

  Fly   901 AYASGVVSLPDQQDYWPAIIATDVLLSGFSSESILGAALIPNSSNFLQRDRTLKCVFKKEQEAAE 965
            ......|.||.:..|.|.||...:....|..:.::|...|.:...|       .|....|....|
 Frog  1392 CLLLMEVRLPREDLYCPPIIVKVIDNRQFGRKPVVGQCTIKSLEEF-------HCDPNSEDLEVE 1449

  Fly   966 --ASTTVSVDEDDE-----DEEEELEWEEEETKPSRISSWWMRLLFAFGLRPAPYANRHALRFHD 1023
              .|..|||...||     |::|.|       .|:::         |.|:..:...|..:.|   
 Frog  1450 DGLSDNVSVTPRDEVLIDIDDKEPL-------IPTQL---------ADGMTSSAIINLSSSR--- 1495

  Fly  1024 DLDDHELVEEREFTWWTKFYNSMYWSAAEMCHEHKHR----LVIYYEELEKQAQFGYLQDWAVPV 1084
                ..|.||....||:|||.|:  ...|.|..:..:    |.:...|||....:..|.|:....
 Frog  1496 ----PSLHEEEFIDWWSKFYASI--GEKEKCGTYLEKGFDTLQVLDTELENIEDYEELSDFCRTF 1554

  Fly  1085 QLVHGVKFKKHGPPKED--IYATLKLQLKLTPCQCPVLEDPGGGGDMVRNMSNPIHPRHQSTLQS 1147
            :|..|    |.....||  :....|...|:    .|:.:||        ::..|.....|...:.
 Frog  1555 KLYRG----KTQDETEDPSVVGEFKGSFKI----YPLPDDP--------SVPRPAPQFRQLPAKG 1603

  Fly  1148 LGETVKLLVRVYVVQGVQMRPRDVKGDSDCYVKLFLGGKTFSDRAHFSPNHSNPVFGRLFEMEAT 1212
            |.|   .|||||:|:...::|:|..|..|.|||:.:|.|:.:|:.|:.|....||||::||:..|
 Frog  1604 LQE---CLVRVYIVRAFGLQPKDPNGKCDPYVKISIGKKSLNDQEHYIPCTLEPVFGKMFELTCT 1665

  Fly  1213 LPGDHMLQVMVYDHDKI-KDEVIGQTNIDLEDRWRTRHRATVGLANEYTKSGYNHWHDVKLPSEI 1276
            ||.:..|:|.:||:|.| |||.||:|.||||:|:.:::.|..||...|..||.|.|.|.:.|||:
 Frog  1666 LPLEKDLKVTLYDYDMISKDEKIGETVIDLENRFLSKYGARCGLPQSYCISGPNQWRDQRKPSEL 1730

  Fly  1277 LIDLCQKRGIQAPYYYGNVIEVDGMLFGDETLISKDEEL----------QERLSLAVLKNMDKLP 1331
            |....|:|..:.|.:..|.|    |....|..:|:.|:.          :|||:|.||:...   
 Frog  1731 LRIFAQQRNFKPPNFKNNSI----MFRNHEYHVSELEDSKFPNPHQGPPEERLALHVLRRQG--- 1788

  Fly  1332 SFGYKLVPEHVETRSLCRDDFPNVEQGKLQLWIELFEANIYVPS-PIDITPVPPADFEVRVVVKN 1395
                 ||.||||||:|.....|::||||||:|::||..::..|. |.:|||.....:.:|.::.|
 Frog  1789 -----LVCEHVETRALYSPLQPDIEQGKLQMWVDLFPKSLGSPGPPFNITPRKAKRYYLRCIIWN 1848

  Fly  1396 LVGIQAGDKNIFGKLMSDVYVIGW-CEDEDKRQSTDIHYRSFAGDAAFNWRMVFGLKYSPNEDLM 1459
            ...:...|.:|.|:.|||:||..| ...|:.:|.||:||||..|:..||||:||...|.|.|.:.
 Frog  1849 TKDVILDDVSITGEKMSDIYVKSWLIGHEENKQKTDVHYRSMGGEGNFNWRLVFPFDYLPAEQVC 1913

  Fly  1460 VIRRKAGL--LEEIEFKKPPIIYLQVWDKDVLTKDEYLAALELNLSNMYAPYPAAQLCK----PY 1518
            .:.||...  |::.|.|.||.:.:|:||.|..:.|:||.:::|:|:.|..|...|:.|:    ..
 Frog  1914 SVSRKEHFWSLDKTENKIPPNLIIQIWDNDKFSFDDYLGSVQLDLNRMPRPAKTAEKCRLDLLDE 1978

  Fly  1519 PKKRKRINLFKRKVINGWFPLQSNAHPSQRSQAAVQNGKMQLSIEVCTDVEAVNRPAGRGQDPP- 1582
            .:.....:||::|.:.||:|.     ..|.....:..||:::::|:..:.|...||||.|:|.| 
 Frog  1979 VESANHCSLFEQKTVKGWWPC-----VGQEGDEKILAGKVEITLEIVNEQEHDERPAGIGRDEPN 2038

  Fly  1583 --MALEPPYRPDSSFNPLTHPCKSFQHILWPVIRKY-----VLWTLLILIVILGLVLF-FSNLPA 1639
              ..||.|.||::||...|.|.|:.::|||   |:|     |.:.|.||::.||:.|: |.|..|
 Frog  2039 MNPRLEDPKRPETSFLWFTSPYKTLKYILW---RRYKWLILVFFLLFILLLFLGIFLYSFPNYAA 2100

  Fly  1640 KLMTIP 1645
            ..:..|
 Frog  2101 MKLVKP 2106

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mfrNP_001137919.1 C2 12..122 CDD:472691 27/109 (25%)
C2 <213..293 CDD:472691 21/108 (19%)
C2D_Ferlin 658..818 CDD:175984 37/165 (22%)
C2E_Ferlin 1155..1277 CDD:176002 56/122 (46%)
C2F_Ferlin 1388..1517 CDD:176020 49/135 (36%)
Ferlin_C 1524..1619 CDD:435183 34/102 (33%)
dysfXP_031751122.1 C2 5..125 CDD:472691
C2B_Ferlin 214..323 CDD:175978 27/109 (25%)
FerI 321..371 CDD:462377 18/67 (27%)
C2C_Ferlin 377..549 CDD:175985 30/176 (17%)
FerA 690..754 CDD:462389 5/63 (8%)
FerB 782..855 CDD:462376 11/76 (14%)
DysFN 871..929 CDD:214777 6/57 (11%)
DysFN 942..998 CDD:214777 11/55 (20%)
C2D_Ferlin 1148..1276 CDD:175984 31/135 (23%)
C2E_Ferlin 1608..1731 CDD:176002 56/122 (46%)
C2F_Ferlin 1842..1973 CDD:176020 49/130 (38%)
Ferlin_C 1985..>2073 CDD:435183 33/95 (35%)
Blue background indicates that the domain is not in the aligned region.

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