DRSC/TRiP Functional Genomics Resources

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Protein Alignment TrpA1 and TRPA1

DIOPT Version :10

Sequence 1:NP_001261600.1 Gene:TrpA1 / 39015 FlyBaseID:FBgn0035934 Length:1232 Species:Drosophila melanogaster
Sequence 2:XP_011515926.1 Gene:TRPA1 / 8989 HGNCID:497 Length:1144 Species:Homo sapiens


Alignment Length:1105 Identity:397/1105 - (35%)
Similarity:632/1105 - (57%) Gaps:86/1105 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 HQAAARNRVNILRYI-RDQNGD-FNAKDNAGNTPLHIAVESDAYDALDYLLSIPVDTGVLNEKKQ 192
            |.|||..::.::..| ||.:.: .:..|:.||||||.|||.:..:::.:|||...:..:.|....
Human    93 HYAAAEGQIELMEKITRDSSLEVLHEMDDYGNTPLHCAVEKNQIESVKFLLSRGANPNLRNFNMM 157

  Fly   193 APVHLATELNKVKSLRVMGQYRNVIDIQQGGEHGRTALHLAAIYDHEECARILITEFDACPRKPC 257
            ||:|:|.:....:.::|:.::| .||:...||:|.||:.:|...::.|..:||:.:    ..|||
Human   158 APLHIAVQGMNNEVMKVLLEHR-TIDVNLEGENGNTAVIIACTTNNSEALQILLKK----GAKPC 217

  Fly   258 NN---GYYPIHEAAKNASSKTMEVFFQWGEQRGCTREEMISFYDSEGNVPLHSAVHGGDIKAVEL 319
            .:   |.:|||:||.:.|.:.||:..::||:.|.:|:..|:|.::....|||.||..||::.:::
Human   218 KSNKWGCFPIHQAAFSGSKECMEIILRFGEEHGYSRQLHINFMNNGKATPLHLAVQNGDLEMIKM 282

  Fly   320 CLKSGAKISTQQHDLSTPVHLACAQGAIDIVKLMFEMQPMEKRLCLSCTDVQKMTPLHCASMFDH 384
            ||.:||:|...:....|.:|.|..|||.:|||||.........: ::.||....|.||.||:|||
Human   283 CLDNGAQIDPVEKGRCTAIHFAATQGATEIVKLMISSYSGSVDI-VNTTDGCHETMLHRASLFDH 346

  Fly   385 PDIVSYLVAEGADINALDKEHRSPLLLAASRSGWKTVHLLIRLGACISVKDAAARNVLHFVIMNG 449
            .::..||::.|||||.:|.|.||||:||.:.:.|..|:||:..||.:.:||...||.||..:...
Human   347 HELADYLISVGADINKIDSEGRSPLILATASASWNIVNLLLSKGAQVDIKDNFGRNFLHLTVQQP 411

  Fly   450 GRLTDFAEQVANCQTQAQLKLLLNEKDSMGCSPLHYASRDGHIRSLENLIRLGACINLKNNNNES 514
            ..|.:...:....|   |:|.|:.::|:.||:|||||.|.|...|:.||:.....|:.|:.:.:|
Human   412 YGLKNLRPEFMQMQ---QIKELVMDEDNDGCTPLHYACRQGGPGSVNNLLGFNVSIHSKSKDKKS 473

  Fly   515 PLHFAARYGRYNTVRQLLDSEKGSFIINESDGAGMTPLHISSQQGHTRVVQLLLNRGALLHRDHT 579
            ||||||.|||.||.::||.....:.::||.|..||||||::::.||.:||||||.:|||...||.
Human   474 PLHFAASYGRINTCQRLLQDISDTRLLNEGDLHGMTPLHLAAKNGHDKVVQLLLKKGALFLSDHN 538

  Fly   580 GRNPLQLAAMSGYTETIELLHSVHSHLLDQVDKDGNTALHLATMENKPHAISVLMSMGCKLVYNV 644
            |...|..|:|.|||:|::::...:....|::|:|||||||.|..|....|:::|:|....:|.|.
Human   539 GWTALHHASMGGYTQTMKVILDTNLKCTDRLDEDGNTALHFAAREGHAKAVALLLSHNADIVLNK 603

  Fly   645 LDMSAIDYAIYYKYPEAALAMVTHEERANEVMALRSDKHP---CVTLALIASMPKVFEAVQDKCI 706
            ...|.:..|::.|..|..|.:: ..:|.:|.:.:.|...|   |....:|..:|:..:.:.|.|:
Human   604 QQASFLHLALHNKRKEVVLTII-RSKRWDECLKIFSHNSPGNKCPITEMIEYLPECMKVLLDFCM 667

  Fly   707 TKANCKKDSKSFYIKYSFAFLQCPFMFAKIDEKTGESITTASPI--PLPALNTMVTHGRVELLAH 769
            ..:...|..:.:||:|:|.:||||..|.|   ||    .|...|  ||.|||.||.:.|:|||.|
Human   668 LHSTEDKSCRDYYIEYNFKYLQCPLEFTK---KT----PTQDVIYEPLTALNAMVQNNRIELLNH 725

  Fly   770 PLSQKYLQMKWNSYGKYFHLANLLIYSIFLVFVTIYSSLMMNNIELKAGDNKTMSQYCNMGWEQL 834
            |:.::||.|||.:||...|:.||..|.:.|:.:||    ::.||:.....|.|            
Human   726 PVCKEYLLMKWLAYGFRAHMMNLGSYCLGLIPMTI----LVVNIKPGMAFNST------------ 774

  Fly   835 TMNLSQNPSVASQIRLDSCEERINRTTAILFCAVVIVVYILLNSMRELIQIYQQKLHYILETVNL 899
              .:....|..|:| ||:....:.:|     |.:::.:..:....:|..||:|||.:|.::..|:
Human   775 --GIINETSDHSEI-LDTTNSYLIKT-----CMILVFLSSIFGYCKEAGQIFQQKRNYFMDISNV 831

  Fly   900 ISWVLYISALVMVTPAFQPDGGINTIHYSAASIAVFLSWFRLLLFLQRFDQVGIYVVMFLEILQT 964
            :.|::|.:.::.|.|.|.....  .:.:...:|||:..|...||:||||:..||::||...||:|
Human   832 LEWIIYTTGIIFVLPLFVEIPA--HLQWQCGAIAVYFYWMNFLLYLQRFENCGIFIVMLEVILKT 894

  Fly   965 LIKVLMVFSILIIAFGLAFYILLSKIIDPQPNHLSFSNIPMSLLRTFSMMLGELDFVGTYVNTYY 1029
            |::..:||..|::||||:|||||: :.||      ||:..:|:::|||||||::::..:::..|.
Human   895 LLRSTVVFIFLLLAFGLSFYILLN-LQDP------FSSPLLSIIQTFSMMLGDINYRESFLEPYL 952

  Fly  1030 RDQLKVPMTSFLILSVFMILMPILLMNLLIGLAVGDIESVRRNAQLKRLAMQVVLHTELERKLPH 1094
            |::|..|:.||..|..|.|.:||:|||||||||||||..|:::|.|||:||||.|||.||:|||.
Human   953 RNELAHPVLSFAQLVSFTIFVPIVLMNLLIGLAVGDIAEVQKHASLKRIAMQVELHTSLEKKLPL 1017

  Fly  1095 VWLQRVDKMELIEYPNETK---------CKLGFCDFILRKWFSNPFTEDSSMDVISFDNNDDYIN 1150
            .:|::||:...|.|||:.:         |.| ||...:|:               ...|.|..:.
Human  1018 WFLRKVDQKSTIVYPNKPRSGGMLFHIFCFL-FCTGEIRQ---------------EIPNADKSLE 1066

  Fly  1151 AELERQRRKLRDISRMLEQQHHLVRLIVQKMEIKTEADDVDEGISPNELRSVVGLRSAGGNRWNS 1215
            .|:.:|:.:|:|::.:||:||.|::||:|||||.:|.:|.|...|..: |..........:|||:
Human  1067 MEILKQKYRLKDLTFLLEKQHELIKLIIQKMEIISETEDDDSHCSFQD-RFKKEQMEQRNSRWNT 1130

  Fly  1216  1215
            Human  1131  1130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrpA1NP_001261600.1 Ank_2 95..183 CDD:463710 20/54 (37%)
ANK repeat 125..155 CDD:293786 7/26 (27%)
ANKYR 140..461 CDD:440430 113/325 (35%)
ANK repeat 157..199 CDD:293786 16/41 (39%)
ANK repeat 259..298 CDD:293786 15/41 (37%)
ANK repeat 300..330 CDD:293786 12/29 (41%)
ANK repeat 336..369 CDD:293786 11/32 (34%)
ANKYR 368..634 CDD:440430 113/265 (43%)
ANK repeat 374..402 CDD:293786 15/27 (56%)
ANK repeat 404..476 CDD:293786 24/71 (34%)
ANK repeat 478..509 CDD:293786 13/30 (43%)
TRPV 481..1093 CDD:454755 233/616 (38%)
ANK repeat 511..545 CDD:293786 16/33 (48%)
ANK repeat 547..576 CDD:293786 17/28 (61%)
ANK repeat 579..611 CDD:293786 9/31 (29%)
ANK repeat 613..638 CDD:293786 12/24 (50%)
TRPA1XP_011515926.1 ANKYR 72..371 CDD:440430 100/283 (35%)
ANK repeat 92..120 CDD:293786 7/26 (27%)
ANK repeat 122..153 CDD:293786 12/30 (40%)
ANK repeat 155..187 CDD:293786 8/32 (25%)
ANK repeat 189..214 CDD:293786 7/28 (25%)
ANK repeat 222..261 CDD:293786 15/38 (39%)
ANKYR 254..544 CDD:440430 119/293 (41%)
ANK repeat 266..294 CDD:293786 12/27 (44%)
ANK repeat 296..364 CDD:293786 28/68 (41%)
ANK repeat 366..397 CDD:293786 13/30 (43%)
ANK repeat 437..468 CDD:293786 13/30 (43%)
ANK repeat 470..504 CDD:293786 16/33 (48%)
ANK repeat 506..536 CDD:293786 17/29 (59%)
Ank_2 511..602 CDD:463710 38/90 (42%)
ANK repeat 538..570 CDD:293786 9/31 (29%)
ANK repeat 572..597 CDD:293786 12/24 (50%)
Ion_trans <821..997 CDD:459842 75/184 (41%)

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