DRSC/TRiP Functional Genomics Resources

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Protein Alignment TrpA1 and Fer1l5

DIOPT Version :9

Sequence 1:NP_001261600.1 Gene:TrpA1 / 39015 FlyBaseID:FBgn0035934 Length:1232 Species:Drosophila melanogaster
Sequence 2:XP_017452278.1 Gene:Fer1l5 / 679806 RGDID:1583681 Length:2083 Species:Rattus norvegicus


Alignment Length:493 Identity:93/493 - (18%)
Similarity:164/493 - (33%) Gaps:185/493 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 NLDDFKRLFMADNSRIALKDAKGRTAAHQAAARNRVNILRYIRDQNGDFNAKDN----------- 156
            |..:....|..:|..|.:.|:        ||:|::..|.|:..|....:::.|:           
  Rat   255 NFHEVPAKFFEENILIEVVDS--------AASRSKAEIGRFQIDIGFIYHSPDHTLQRKWLGLCQ 311

  Fly   157 ---------------------AGNTPL--HIAVESDAYDALDYLLSIPVDTGVLNEKKQAPVHLA 198
                                 ....|:  .:..|.|:...:.....:||....|    |..::.|
  Rat   312 RNKTTSGIRGYLKVTICALGVGDEAPVDQKLPYEDDSQVKIFKSTQVPVSLAYL----QFFIYCA 372

  Fly   199 TELNKVKSLRVMGQYRN------VIDIQQGGEHGRTALHLAAIYDHEECARILITEFDACPRKPC 257
            .:|:          :||      .::::..|:..||  :..:..|.....:||..:.    :.||
  Rat   373 EDLH----------FRNPQSATPALEVELIGDKLRT--YPKSQSDSPIWNQILTFQI----QLPC 421

  Fly   258 NNGYYPIHEAAKNASSKTMEVFFQWGEQRGC------TREEMISFYDSEGNVPLHS----AVHGG 312
            .:.|........:.|:...|:    |....|      |.||:...|  .|.:|...    .:.||
  Rat   422 LSSYIKFRVLDCSKSNCRDEI----GSASLCLSQISSTGEEIQGMY--SGFLPCFGPSFLTLRGG 480

  Fly   313 D---IKAVE--LCL-----KSG------------AKISTQQ----HDLSTPVHLACAQGAIDIVK 351
            :   .:..|  .|:     |.|            .||.:||    .|||.           :::|
  Rat   481 EKPPFRTTEEGTCILDAVNKDGLAYRGRIFIEIVTKIKSQQDSVMKDLSQ-----------EVIK 534

  Fly   352 LMFEMQPMEKR--LC---LSCTDVQKMTPLHCASMFDHPDIVSYLVAEGADINALDKEHR----- 406
            :  |||...::  ||   ||||.:.|.           .|::.:.|:.|...|.:|..::     
  Rat   535 V--EMQQYRQKYGLCVVFLSCTMMPKF-----------KDLIQFEVSMGHYGNKMDPNYKPLVST 586

  Fly   407 ---SPLL----------------LAASRSGWKTVHLLIRLGACISVKDAAARNVLHFVIMNGGRL 452
               ||::                :.|..|.|:.|...:.   |:        |:||   :...||
  Rat   587 TQHSPVIYDGTSYHYVPWYNTKPVVAVTSNWEDVSFRMN---CL--------NLLH---VTRDRL 637

  Fly   453 ---TDFAEQVANCQTQAQL----KLLLN-EKDSMGCSP 482
               .|..:.:.|.:..|.|    |||.: ::|..|..|
  Rat   638 KTNLDILKSIRNPRDPALLQQWEKLLKDLQEDCRGPLP 675

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrpA1NP_001261600.1 Ank_2 95..188 CDD:289560 17/118 (14%)
ANK 121..246 CDD:238125 24/164 (15%)
ANK repeat 125..155 CDD:293786 6/29 (21%)
ANK repeat 157..199 CDD:293786 7/43 (16%)
Ank_2 230..330 CDD:289560 24/131 (18%)
ANK repeat 259..298 CDD:293786 8/44 (18%)
ANK 298..425 CDD:238125 37/185 (20%)
ANK repeat 300..330 CDD:293786 10/55 (18%)
Ank_2 305..402 CDD:289560 28/131 (21%)
ANK repeat 336..369 CDD:293786 9/37 (24%)
ANK repeat 374..402 CDD:293786 4/27 (15%)
ANK repeat 404..476 CDD:293786 19/103 (18%)
ANK 473..599 CDD:238125 3/11 (27%)
ANK repeat 478..509 CDD:293786 2/5 (40%)
Ank_2 483..572 CDD:289560 93/493 (19%)
ANK repeat 511..545 CDD:293786
ANK 542..662 CDD:238125
ANK repeat 547..576 CDD:293786
Ank_2 552..643 CDD:289560
ANK repeat 579..611 CDD:293786
ANK repeat 613..638 CDD:293786
Ion_trans 858..1074 CDD:278921
Fer1l5XP_017452278.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1326
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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